Published data collections

A molecular single-cell lung atlas of lethal COVID-19

https://doi.org/10.1038/s41586-021-03569-1Deposited data# 116,313 cells

A single-cell and spatially resolved atlas of human breast cancers

https://doi.org/10.1038/s41588-021-00911-1Deposited data# 100,064 cells

A single-cell atlas of human and mouse white adipose tissue

https://doi.org/10.1038/s41586-022-04518-2Deposited data# 166,149 cells

Abdominal White Adipose Tissue

https://cellxgene.cziscience.com/collections/6b701826-37bb-4356-9792-ff41fc4c3161Deposited data# 72,335 cells

Cell atlas of the human ocular anterior segment: Tissue-specific and shared cell types

https://doi.org/10.1073/pnas.2200914119Deposited data# 195,248 cells

Charting human development using a multi-endodermal organ atlas and organoid models

https://doi.org/10.1016/j.cell.2021.04.028Deposited data# 155,232 cells

Comparative transcriptomics reveals human-specific cortical features

https://doi.org/10.1126/science.ade9516Deposited data# 156,285 cells

Cryptic exon detection and transcriptomic changes revealed in single-nuclei RNA sequencing of C9ORF72 patients spanning the ALS-FTD spectrum

https://doi.org/10.1007/s00401-023-02599-5Deposited data# 461,290 cells

Dysregulated lung stroma drives emphysema exacerbation by potentiating resident lymphocytes to suppress an epithelial stem cell reservoir

https://doi.org/10.1016/j.immuni.2023.01.032Deposited data# 57,747 cells

Dysregulation of brain and choroid plexus cell types in severe COVID-19

https://doi.org/10.1038/s41586-021-03710-0Deposited data# 65,309 cells

Identification of distinct tumor cell populations and key genetic mechanisms through single cell sequencing in hepatoblastoma

https://doi.org/10.1038/s42003-021-02562-8Deposited data# 67,110 cells

Mapping single-cell transcriptomes in the intra-tumoral and associated territories of kidney cancer

https://doi.org/10.1016/j.ccell.2022.11.001Deposited data# 270,855 cells

Mapping the temporal and spatial dynamics of the human endometrium in vivo and in vitro

https://doi.org/10.1038/s41588-021-00972-2Deposited data# 218,979 cells

Multi-omic profiling of the developing human cerebral cortex at the single cell level

https://doi.org/10.1126/sciadv.adg3754Deposited data# 45,549 cells

Multimodal single cell sequencing implicates chromatin accessibility and genetic background in diabetic kidney disease progression

https://doi.org/10.1038/s41467-022-32972-zDeposited data# 39,176 cells

Resolving cellular and molecular diversity along the hippocampal anterior-to-posterior axis in humans

https://doi.org/10.1016/j.neuron.2021.05.003Deposited data# 129,905 cells

SARS‐CoV‐2 receptor ACE2 and TMPRSS2 are primarily expressed in bronchial transient secretory cells

https://doi.org/10.15252/embj.20105114Deposited data# 57,229 cells

Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer

https://doi.org/10.1016/j.ccell.2021.09.008Deposited data# 147,137 cells

Single cell transcriptional and chromatin accessibility profiling redefine cellular heterogeneity in the adult human kidney

https://doi.org/10.1038/s41467-021-22368-wDeposited data# 19,985 cells

Single nuclei transcriptomics in human and non-human primate striatum in opioid use disorder

https://doi.org/10.1038/s41467-024-45165-7Deposited data# 98,848 cells

Single-cell genomic profiling of human dopamine neurons identifies a population that selectively degenerates in Parkinson’s disease

https://doi.org/10.1038/s41593-022-01061-1Deposited data# 572,156 cells

Single-cell, single-nucleus, and spatial transcriptomics characterization of the immunological landscape in the healthy and PSC human liver

https://doi.org/10.1016/j.jhep.2023.12.023Deposited data# 195,417 cells

Spatial and cell type transcriptional landscape of human cerebellar development

https://doi.org/10.1038/s41593-021-00872-yDeposited data# 69,174 cells

Spatial multi-omic map of human myocardial infarction

https://doi.org/10.1038/s41586-022-05060-xDeposited data# 191,795 cells

Spatially resolved multiomics of human cardiac niches

https://doi.org/10.1038/s41586-023-06311-1Deposited data# 704,296 cells