Published data collections

A single-cell comparison of adult and fetal human epicardium defines the age-associated changes in epicardial activity

https://doi.org/10.1038/s44161-022-00183-wDeposited data# 60,668 cells

Altered human oligodendrocyte heterogeneity in multiple sclerosis

https://doi.org/10.1038/s41586-019-0903-2Deposited data# 17,799 cells

Blood and immune development in human fetal bone marrow and Down syndrome

https://doi.org/10.1038/s41586-021-03929-xDeposited data# 156,947 cells

Cell Types of the Human Retina and Its Organoids at Single-Cell Resolution

https://doi.org/10.1016/j.cell.2020.08.013Deposited data# 98,348 cells

Cells of the adult human heart

https://doi.org/10.1038/s41586-020-2797-4Deposited data# 486,134 cells

Charting human development using a multi-endodermal organ atlas and organoid models

https://doi.org/10.1016/j.cell.2021.04.028Deposited data# 155,232 cells

Comparative transcriptomics reveals human-specific cortical features

https://doi.org/10.1126/science.ade9516Deposited data# 156,285 cells

Construction of a human cell landscape at single-cell level

https://doi.org/10.1038/s41586-020-2157-4Deposited data# 599,926 cells

Cryptic exon detection and transcriptomic changes revealed in single-nuclei RNA sequencing of C9ORF72 patients spanning the ALS-FTD spectrum

https://doi.org/10.1007/s00401-023-02599-5Deposited data# 461,290 cells

Differential pre-malignant programs and microenvironment chart distinct paths to malignancy in human colorectal polyps

https://doi.org/10.1016/j.cell.2021.11.031Deposited data# 133,507 cells

Dysregulation of brain and choroid plexus cell types in severe COVID-19

https://doi.org/10.1038/s41586-021-03710-0Deposited data# 65,309 cells

HCA kidney seed network: University of Michigan

https://explore.data.humancellatlas.org/projects/29ed827b-c539-4f4c-bb6b-ce8f9173dfb7Deposited data# 48,783 cells

Human photoreceptor cells from different macular subregions have distinct transcriptional profiles

https://doi.org/10.1093/hmg/ddab140Deposited data# 34,323 cells

Identification of distinct tumor cell populations and key genetic mechanisms through single cell sequencing in hepatoblastoma

https://doi.org/10.1038/s42003-021-02562-8Deposited data# 67,110 cells

Mapping single-cell transcriptomes in the intra-tumoral and associated territories of kidney cancer

https://doi.org/10.1016/j.ccell.2022.11.001Deposited data# 270,855 cells

Molecular characterization of selectively vulnerable neurons in Alzheimer's Disease

https://doi.org/10.1038/s41593-020-00764-7Deposited data# 106,136 cells

Multi-omic profiling of the developing human cerebral cortex at the single cell level

https://doi.org/10.1126/sciadv.adg3754Deposited data# 45,549 cells

Resolving cellular and molecular diversity along the hippocampal anterior-to-posterior axis in humans

https://doi.org/10.1016/j.neuron.2021.05.003Deposited data# 129,905 cells

Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer

https://doi.org/10.1016/j.ccell.2021.09.008Deposited data# 147,137 cells

Single cell RNA sequencing of human liver reveals distinct intrahepatic macrophage populations

https://doi.org/10.1038/s41467-018-06318-7Deposited data# 8,444 cells

Single cell derived mRNA signals across human kidney tumors

https://doi.org/10.1038/s41467-021-23949-5Deposited data# 31,839 cells

Single cell transcriptomic profiling identifies molecular phenotypes of newborn human lung cells

https://doi.org/10.3390/genes15030298Deposited data# 5,499 cells

Single nuclei transcriptomics in human and non-human primate striatum in opioid use disorder

https://doi.org/10.1038/s41467-024-45165-7Deposited data# 98,848 cells

Single-Cell, Single-Nucleus, and Spatial RNA Sequencing of the Human Liver Identifies Cholangiocyte and Mesenchymal Heterogeneity

https://doi.org/10.1002/hep4.1854Deposited data# 73,295 cells

Single-cell analyses of renal cell cancers reveal insights into tumor microenvironment, cell of origin, and therapy response

https://doi.org/10.1073/pnas.2103240118Deposited data# 29,129 cells

Single-cell genomic profiling of human dopamine neurons identifies a population that selectively degenerates in Parkinson’s disease

https://doi.org/10.1038/s41593-022-01061-1Deposited data# 572,156 cells

Single-cell transcriptomes from human kidneys reveal the cellular identity of renal tumors

https://doi.org/10.1126/science.aat1699Deposited data# 40,268 cells

Single-cell transcriptomic atlas of the human retina identifies cell types associated with age-related macular degeneration

https://doi.org/10.1038/s41467-019-12780-8Deposited data# 20,091 cells

Single-cell transcriptomics of the human retinal pigment epithelium and choroid in health and macular degeneration

https://doi.org/10.1073/pnas.1914143116Deposited data# 4,335 cells

Single-cell, single-nucleus, and spatial transcriptomics characterization of the immunological landscape in the healthy and PSC human liver

https://doi.org/10.1016/j.jhep.2023.12.023Deposited data# 195,417 cells

Spatial multi-omic map of human myocardial infarction

https://doi.org/10.1038/s41586-022-05060-xDeposited data# 191,795 cells

Spatial proteogenomics reveals distinct and evolutionarily conserved hepatic macrophage niches

https://doi.org/10.1016/j.cell.2021.12.018Deposited data# 167,598 cells

Spatially resolved multiomics of human cardiac niches

https://doi.org/10.1038/s41586-023-06311-1Deposited data# 704,296 cells

Spatiotemporal analysis of human intestinal development at single-cell resolution

https://doi.org/10.1016/j.cell.2020.12.016Deposited data# 76,592 cells

Spatiotemporal immune zonation of the human kidney

https://doi.org/10.1126/science.aat5031Deposited data# 67,465 cells