Published data collections

A spatially resolved single cell genomic atlas of the adult human breast

https://doi.org/10.1038/s41586-023-06252-9Deposited data# 831,677 cells

An integrated cell atlas of the lung in health and disease

https://doi.org/10.1038/s41591-023-02327-2Deposited data# 584,944 cells

Cross-tissue immune cell analysis reveals tissue-specific features in humans

https://doi.org/10.1126/science.abl5197Deposited data# 329,762 cells

HCA kidney seed network: University of Michigan

https://explore.data.humancellatlas.org/projects/29ed827b-c539-4f4c-bb6b-ce8f9173dfb7Deposited data# 48,783 cells

Integrated analysis of multimodal single-cell data (version 2)

https://doi.org/10.1016/j.cell.2021.04.048Deposited data# 584,884 cells

Local and systemic responses to SARS-CoV-2 infection in children and adults

https://doi.org/10.1038/s41586-021-04345-xDeposited data# 659,197 cells

Mapping single-cell transcriptomes in the intra-tumoral and associated territories of kidney cancer

https://doi.org/10.1016/j.ccell.2022.11.001Deposited data# 270,855 cells

Multi-scale spatial mapping of cell populations across anatomical sites in healthy human skin and basal cell carcinoma

https://doi.org/10.1073%2Fpnas.2313326120Deposited data# 152,189 cells

Polybacterial intracellular coinfection of epithelial stem cells in periodontitis

https://doi.org/10.1101/2023.08.23.554343Deposited data# 105,918 cells

Single-Cell Sequencing of Developing Human Gut Reveals Transcriptional Links to Childhood Crohn’s Disease

https://doi.org/10.1016/j.devcel.2020.11.010Deposited data# 85,351 cells

Single-cell Atlas of common variable immunodeficiency shows germinal center-associated epigenetic dysregulation in B-cell responses

https://doi.org/10.1038/s41467-022-29450-xDeposited data# 113,289 cells

Single-cell multiomics reveals increased plasticity, resistant populations, and stem-cell–like blasts in KMT2A-rearranged leukemia

https://doi.org/10.1182/blood.2021013442Deposited data# 128,588 cells

Single-cell reconstruction of the early maternal–fetal interface in humans

https://doi.org/10.1038/s41586-018-0698-6Deposited data# 70,325 cells

Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy

https://doi.org/10.1016/j.ccell.2021.03.007Deposited data# 167,283 cells

Spatial proteogenomics reveals distinct and evolutionarily conserved hepatic macrophage niches

https://doi.org/10.1016/j.cell.2021.12.018Deposited data# 167,598 cells

The landscape of immune dysregulation in Crohn’s disease revealed through single-cell transcriptomic profiling in the ileum and colon

https://doi.org/10.1016/j.immuni.2023.01.002Deposited data# 720,633 cells

Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19

https://doi.org/10.1126/scitranslmed.abh2624Deposited data# 600,929 cells

scRNA-seq assessment of the human lung, spleen, and esophagus tissue stability after cold preservation

https://doi.org/10.1186/s13059-019-1906-xDeposited data# 239,222 cells