Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 10 studies | 37% ± 19% | |
endothelial cell | 7 studies | 26% ± 8% | |
oligodendrocyte | 7 studies | 26% ± 6% | |
adipocyte | 5 studies | 27% ± 6% | |
fibroblast | 5 studies | 23% ± 7% | |
microglial cell | 4 studies | 20% ± 3% | |
epithelial cell | 4 studies | 22% ± 6% | |
cardiac muscle cell | 4 studies | 32% ± 6% | |
GABAergic neuron | 4 studies | 41% ± 16% | |
oligodendrocyte precursor cell | 4 studies | 33% ± 9% | |
glutamatergic neuron | 3 studies | 57% ± 12% | |
interneuron | 3 studies | 41% ± 22% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1155.19 | 2642 / 2642 | 100% | 19.30 | 704 / 705 |
prostate | 100% | 807.32 | 245 / 245 | 98% | 20.54 | 492 / 502 |
breast | 100% | 843.29 | 459 / 459 | 97% | 14.82 | 1088 / 1118 |
thymus | 100% | 1741.22 | 653 / 653 | 97% | 19.26 | 587 / 605 |
ovary | 100% | 992.94 | 180 / 180 | 94% | 7.97 | 405 / 430 |
lung | 99% | 584.15 | 574 / 578 | 93% | 8.85 | 1070 / 1155 |
esophagus | 100% | 427.76 | 1438 / 1445 | 86% | 7.92 | 158 / 183 |
kidney | 100% | 531.88 | 89 / 89 | 85% | 5.95 | 769 / 901 |
bladder | 100% | 618.00 | 21 / 21 | 85% | 6.81 | 428 / 504 |
uterus | 99% | 505.53 | 169 / 170 | 81% | 6.35 | 372 / 459 |
stomach | 98% | 401.35 | 353 / 359 | 80% | 5.28 | 230 / 286 |
pancreas | 97% | 338.84 | 318 / 328 | 81% | 4.77 | 144 / 178 |
intestine | 100% | 406.20 | 962 / 966 | 77% | 4.76 | 406 / 527 |
liver | 100% | 776.57 | 225 / 226 | 68% | 4.57 | 276 / 406 |
adrenal gland | 100% | 1521.05 | 258 / 258 | 63% | 4.54 | 145 / 230 |
skin | 98% | 439.76 | 1775 / 1809 | 59% | 3.31 | 277 / 472 |
spleen | 100% | 705.89 | 241 / 241 | 0% | 0 | 0 / 0 |
muscle | 100% | 596.74 | 801 / 803 | 0% | 0 | 0 / 0 |
adipose | 100% | 666.07 | 1199 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 621.73 | 1326 / 1335 | 0% | 0 | 0 / 0 |
heart | 97% | 590.77 | 837 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 76% | 5.97 | 22 / 29 |
tonsil | 0% | 0 | 0 / 0 | 62% | 3.89 | 28 / 45 |
peripheral blood | 25% | 202.35 | 234 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 21% | 0.92 | 17 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZNF680 |
Protein name | Zinc finger protein 680 |
Synonyms | |
Description | FUNCTION: May be involved in transcriptional regulation. |
Accessions | ENST00000309683.11 [Q8NEM1-1] Q8NEM1 ENST00000447137.2 [Q8NEM1-2] |