Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 11 studies | 36% ± 15% | |
endothelial cell | 8 studies | 21% ± 5% | |
adipocyte | 8 studies | 25% ± 6% | |
GABAergic neuron | 7 studies | 33% ± 13% | |
fibroblast | 7 studies | 23% ± 5% | |
astrocyte | 6 studies | 30% ± 6% | |
glutamatergic neuron | 5 studies | 42% ± 12% | |
cardiac muscle cell | 5 studies | 27% ± 7% | |
interneuron | 4 studies | 42% ± 14% | |
oligodendrocyte precursor cell | 4 studies | 30% ± 9% | |
macrophage | 3 studies | 19% ± 3% | |
type I pneumocyte | 3 studies | 19% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 246.40 | 2642 / 2642 | 100% | 3.94 | 704 / 705 |
breast | 100% | 217.89 | 459 / 459 | 99% | 4.09 | 1112 / 1118 |
esophagus | 100% | 188.79 | 1445 / 1445 | 99% | 3.49 | 182 / 183 |
prostate | 100% | 247.44 | 245 / 245 | 99% | 3.28 | 499 / 502 |
ovary | 100% | 277.03 | 180 / 180 | 99% | 3.74 | 427 / 430 |
lung | 100% | 179.14 | 576 / 578 | 99% | 3.16 | 1148 / 1155 |
stomach | 100% | 164.47 | 359 / 359 | 99% | 3.12 | 283 / 286 |
uterus | 100% | 223.23 | 170 / 170 | 99% | 3.36 | 453 / 459 |
bladder | 100% | 214.48 | 21 / 21 | 98% | 3.03 | 495 / 504 |
intestine | 100% | 193.39 | 966 / 966 | 98% | 2.86 | 516 / 527 |
pancreas | 99% | 127.77 | 326 / 328 | 98% | 2.91 | 175 / 178 |
thymus | 100% | 235.05 | 653 / 653 | 98% | 2.45 | 591 / 605 |
adrenal gland | 100% | 163.34 | 258 / 258 | 94% | 2.06 | 216 / 230 |
kidney | 100% | 171.67 | 89 / 89 | 91% | 2.16 | 818 / 901 |
skin | 100% | 203.74 | 1807 / 1809 | 86% | 1.99 | 404 / 472 |
liver | 100% | 122.02 | 226 / 226 | 80% | 1.60 | 326 / 406 |
adipose | 100% | 229.97 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 207.98 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 148.24 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.01 | 1 / 1 |
muscle | 100% | 156.09 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 139.28 | 851 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 2.54 | 43 / 45 |
lymph node | 0% | 0 | 0 / 0 | 72% | 1.13 | 21 / 29 |
eye | 0% | 0 | 0 / 0 | 70% | 1.43 | 56 / 80 |
peripheral blood | 54% | 47.76 | 505 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZNF565 |
Protein name | Zinc finger protein 565 |
Synonyms | |
Description | FUNCTION: May be involved in transcriptional regulation. |
Accessions | K7EL42 Q8N9K5 K7ESE2 ENST00000355114.9 [Q8N9K5-1] ENST00000304116.10 [Q8N9K5-2] ENST00000591473.1 ENST00000392173.6 [Q8N9K5-2] ENST00000585994.1 |