Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 6 studies | 19% ± 6% | |
epithelial cell | 5 studies | 31% ± 14% | |
GABAergic neuron | 4 studies | 31% ± 4% | |
glutamatergic neuron | 4 studies | 39% ± 6% | |
macrophage | 4 studies | 20% ± 3% | |
astrocyte | 4 studies | 23% ± 5% | |
oligodendrocyte precursor cell | 3 studies | 22% ± 7% | |
dendritic cell | 3 studies | 19% ± 1% | |
interneuron | 3 studies | 34% ± 13% | |
neuron | 3 studies | 24% ± 4% | |
oligodendrocyte | 3 studies | 19% ± 2% | |
microglial cell | 3 studies | 23% ± 3% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 29% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2020.47 | 1445 / 1445 | 100% | 12.44 | 183 / 183 |
brain | 100% | 1172.23 | 2640 / 2642 | 100% | 8.36 | 705 / 705 |
prostate | 100% | 1915.71 | 245 / 245 | 100% | 9.34 | 501 / 502 |
breast | 100% | 1700.91 | 459 / 459 | 100% | 10.80 | 1114 / 1118 |
bladder | 100% | 1793.67 | 21 / 21 | 99% | 8.48 | 500 / 504 |
uterus | 100% | 1720.74 | 170 / 170 | 99% | 7.55 | 455 / 459 |
pancreas | 100% | 1047.02 | 328 / 328 | 99% | 6.70 | 176 / 178 |
intestine | 100% | 1641.47 | 966 / 966 | 99% | 8.05 | 521 / 527 |
thymus | 100% | 1646.85 | 653 / 653 | 99% | 5.45 | 598 / 605 |
stomach | 100% | 1219.28 | 359 / 359 | 99% | 8.61 | 282 / 286 |
lung | 100% | 1731.52 | 578 / 578 | 98% | 7.96 | 1137 / 1155 |
ovary | 100% | 1629.53 | 180 / 180 | 98% | 7.24 | 422 / 430 |
skin | 100% | 1571.85 | 1809 / 1809 | 94% | 7.04 | 445 / 472 |
kidney | 100% | 1194.45 | 89 / 89 | 92% | 5.10 | 830 / 901 |
adrenal gland | 100% | 1358.62 | 258 / 258 | 92% | 4.62 | 211 / 230 |
liver | 100% | 827.37 | 226 / 226 | 68% | 2.81 | 278 / 406 |
adipose | 100% | 1432.64 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1218.81 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 4.81 | 29 / 29 |
spleen | 100% | 1792.27 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 8.95 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.88 | 1 / 1 |
heart | 99% | 951.89 | 851 / 861 | 0% | 0 | 0 / 0 |
muscle | 95% | 451.33 | 759 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 89% | 806.03 | 823 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 75% | 2.98 | 60 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZNF562 |
Protein name | Zinc finger protein 562 |
Synonyms | |
Description | FUNCTION: May be involved in transcriptional regulation. |
Accessions | ENST00000585350.1 ENST00000587392.5 ENST00000590155.5 K7ENE4 K7EQZ2 A0A0G2JLJ0 ENST00000585688.5 ENST00000453372.7 [Q6V9R5-1] K7EIE6 ENST00000588653.5 K7ELE4 ENST00000589542.1 K7EN01 Q6V9R5 ENST00000293648.8 [Q6V9R5-2] |