Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 11 studies | 51% ± 25% | |
oligodendrocyte | 10 studies | 33% ± 12% | |
GABAergic neuron | 8 studies | 52% ± 24% | |
oligodendrocyte precursor cell | 6 studies | 34% ± 15% | |
endothelial cell | 5 studies | 30% ± 9% | |
astrocyte | 5 studies | 31% ± 10% | |
interneuron | 5 studies | 55% ± 30% | |
neuron | 4 studies | 37% ± 11% | |
retina horizontal cell | 4 studies | 26% ± 2% | |
epithelial cell | 3 studies | 21% ± 7% | |
amacrine cell | 3 studies | 25% ± 2% | |
rod bipolar cell | 3 studies | 31% ± 7% | |
granule cell | 3 studies | 36% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 261.68 | 2637 / 2642 | 99% | 11.06 | 700 / 705 |
thymus | 100% | 306.74 | 652 / 653 | 98% | 8.55 | 591 / 605 |
prostate | 99% | 252.71 | 243 / 245 | 96% | 3.25 | 483 / 502 |
adrenal gland | 98% | 221.50 | 254 / 258 | 94% | 15.23 | 217 / 230 |
kidney | 97% | 105.47 | 86 / 89 | 87% | 2.64 | 780 / 901 |
breast | 95% | 236.31 | 437 / 459 | 72% | 2.19 | 809 / 1118 |
pancreas | 77% | 68.43 | 252 / 328 | 78% | 3.04 | 139 / 178 |
ovary | 100% | 428.27 | 180 / 180 | 55% | 1.13 | 236 / 430 |
lung | 90% | 121.47 | 522 / 578 | 55% | 1.47 | 635 / 1155 |
uterus | 100% | 340.78 | 170 / 170 | 41% | 0.88 | 190 / 459 |
esophagus | 78% | 129.00 | 1128 / 1445 | 60% | 1.58 | 109 / 183 |
stomach | 91% | 127.36 | 328 / 359 | 30% | 0.76 | 87 / 286 |
bladder | 90% | 161.57 | 19 / 21 | 27% | 0.61 | 134 / 504 |
skin | 69% | 67.80 | 1249 / 1809 | 32% | 0.70 | 152 / 472 |
intestine | 84% | 145.47 | 815 / 966 | 17% | 0.42 | 87 / 527 |
blood vessel | 98% | 202.83 | 1313 / 1335 | 0% | 0 | 0 / 0 |
adipose | 89% | 116.23 | 1067 / 1204 | 0% | 0 | 0 / 0 |
heart | 82% | 105.60 | 708 / 861 | 0% | 0 | 0 / 0 |
spleen | 65% | 50.93 | 157 / 241 | 0% | 0 | 0 / 0 |
liver | 49% | 49.79 | 110 / 226 | 13% | 0.23 | 53 / 406 |
eye | 0% | 0 | 0 / 0 | 33% | 0.59 | 26 / 80 |
tonsil | 0% | 0 | 0 / 0 | 24% | 0.48 | 11 / 45 |
lymph node | 0% | 0 | 0 / 0 | 17% | 0.36 | 5 / 29 |
muscle | 7% | 4.76 | 59 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 7% | 4.33 | 67 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZNF483 |
Protein name | Zinc finger protein 483 (Zinc finger protein with KRAB and SCAN domains 16) ZNF483 protein (Zinc finger protein 483) Zinc finger protein 483 |
Synonyms | ZKSCAN16 KIAA1962 |
Description | FUNCTION: May be involved in transcriptional regulation. |
Accessions | ENST00000309235.6 [Q8TF39-1] A7MD06 Q8TF39 ENST00000355824.7 ENST00000358151.8 [Q8TF39-2] Q5VZN3 Q6P088 ENST00000374374.3 |