Name | Number of supported studies | Average coverage | |
---|---|---|---|
GABAergic neuron | 4 studies | 35% ± 13% | |
glutamatergic neuron | 4 studies | 40% ± 14% | |
epithelial cell | 3 studies | 23% ± 8% | |
neuron | 3 studies | 20% ± 4% | |
astrocyte | 3 studies | 22% ± 4% | |
oligodendrocyte | 3 studies | 18% ± 3% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 31% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 2943.37 | 245 / 245 | 100% | 6.02 | 502 / 502 |
esophagus | 100% | 2091.38 | 1444 / 1445 | 100% | 5.53 | 183 / 183 |
brain | 100% | 2424.79 | 2637 / 2642 | 100% | 9.32 | 704 / 705 |
breast | 100% | 2617.99 | 459 / 459 | 100% | 6.73 | 1114 / 1118 |
intestine | 100% | 2614.59 | 966 / 966 | 100% | 4.48 | 525 / 527 |
bladder | 100% | 2527.62 | 21 / 21 | 99% | 4.24 | 501 / 504 |
uterus | 100% | 3674.12 | 170 / 170 | 99% | 4.89 | 454 / 459 |
lung | 100% | 2743.87 | 578 / 578 | 99% | 4.73 | 1140 / 1155 |
thymus | 100% | 2500.25 | 652 / 653 | 99% | 4.31 | 598 / 605 |
ovary | 100% | 4073.41 | 180 / 180 | 99% | 4.78 | 424 / 430 |
pancreas | 100% | 1594.82 | 327 / 328 | 99% | 4.54 | 176 / 178 |
stomach | 100% | 2065.11 | 359 / 359 | 98% | 5.09 | 280 / 286 |
skin | 100% | 2168.15 | 1809 / 1809 | 98% | 4.68 | 461 / 472 |
kidney | 100% | 1839.07 | 89 / 89 | 98% | 3.97 | 879 / 901 |
adrenal gland | 100% | 1838.87 | 258 / 258 | 97% | 5.19 | 224 / 230 |
liver | 100% | 1558.65 | 226 / 226 | 91% | 2.74 | 369 / 406 |
adipose | 100% | 2466.36 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 2927.02 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.62 | 1 / 1 |
blood vessel | 100% | 2379.73 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 1438.68 | 801 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 1518.64 | 851 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 4.16 | 44 / 45 |
peripheral blood | 95% | 2158.18 | 878 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 93% | 3.31 | 27 / 29 |
eye | 0% | 0 | 0 / 0 | 80% | 2.24 | 64 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0044726 | Biological process | epigenetic programing of female pronucleus |
GO_0044027 | Biological process | negative regulation of gene expression via chromosomal CpG island methylation |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0003682 | Molecular function | chromatin binding |
GO_0010385 | Molecular function | double-stranded methylated DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZNF445 |
Protein name | Zinc finger protein 445 (ZFP445) (Zinc finger protein 168) (Zinc finger protein with KRAB and SCAN domains 15) |
Synonyms | ZNF168 ZFP445 ZKSCAN15 |
Description | FUNCTION: Transcription regulator required to maintain maternal and paternal gene imprinting, a process by which gene expression is restricted in a parent of origin-specific manner by epigenetic modification of genomic DNA and chromatin, including DNA methylation. Acts by controlling DNA methylation during the earliest multicellular stages of development at multiple imprinting control regions (ICRs) . Acts together with ZFP57, but seems to be the major factor in human early embryonic imprinting maintenance. In contrast, in mice, ZFP57 plays the predominant role in imprinting maintenance . . |
Accessions | ENST00000396077.8 ENST00000425708.6 P59923 |