Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 4 studies | 22% ± 2% | |
astrocyte | 4 studies | 24% ± 6% | |
glutamatergic neuron | 4 studies | 40% ± 13% | |
oligodendrocyte | 4 studies | 21% ± 3% | |
GABAergic neuron | 3 studies | 40% ± 5% | |
adipocyte | 3 studies | 20% ± 1% | |
interneuron | 3 studies | 38% ± 20% | |
neuron | 3 studies | 21% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 34% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 385.87 | 245 / 245 | 100% | 9.70 | 502 / 502 |
thymus | 100% | 547.57 | 653 / 653 | 100% | 9.89 | 603 / 605 |
brain | 100% | 499.27 | 2641 / 2642 | 100% | 11.45 | 702 / 705 |
breast | 100% | 359.21 | 459 / 459 | 99% | 10.11 | 1102 / 1118 |
ovary | 100% | 452.28 | 180 / 180 | 98% | 8.38 | 422 / 430 |
kidney | 100% | 345.99 | 89 / 89 | 97% | 7.85 | 873 / 901 |
adrenal gland | 100% | 668.87 | 258 / 258 | 96% | 6.87 | 220 / 230 |
pancreas | 100% | 380.96 | 327 / 328 | 85% | 4.24 | 151 / 178 |
bladder | 100% | 329.95 | 21 / 21 | 81% | 4.30 | 409 / 504 |
lung | 98% | 298.38 | 569 / 578 | 79% | 4.75 | 917 / 1155 |
stomach | 99% | 229.66 | 355 / 359 | 78% | 3.64 | 223 / 286 |
intestine | 100% | 309.60 | 966 / 966 | 73% | 2.94 | 383 / 527 |
liver | 98% | 220.23 | 221 / 226 | 68% | 2.74 | 276 / 406 |
uterus | 100% | 401.02 | 170 / 170 | 55% | 2.92 | 252 / 459 |
skin | 100% | 275.63 | 1801 / 1809 | 54% | 2.31 | 255 / 472 |
esophagus | 99% | 254.31 | 1429 / 1445 | 55% | 2.79 | 100 / 183 |
spleen | 100% | 467.58 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.17 | 1 / 1 |
adipose | 100% | 300.88 | 1200 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 237.76 | 1327 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 228.41 | 794 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 4.31 | 28 / 29 |
heart | 92% | 179.76 | 796 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 85% | 354.80 | 793 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 35% | 1.16 | 28 / 80 |
tonsil | 0% | 0 | 0 / 0 | 27% | 0.80 | 12 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZNF429 |
Protein name | Zinc finger protein 429 |
Synonyms | |
Description | FUNCTION: May be involved in transcriptional regulation. |
Accessions | ENST00000358491.9 ENST00000594385.1 M0QZ47 M0QYC4 ENST00000597078.5 Q86V71 |