Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| endothelial cell | 4 studies | 20% ± 4% | |
| astrocyte | 4 studies | 24% ± 4% | |
| glutamatergic neuron | 4 studies | 45% ± 18% | |
| oligodendrocyte | 4 studies | 21% ± 2% | |
| GABAergic neuron | 3 studies | 43% ± 10% | |
| oligodendrocyte precursor cell | 3 studies | 23% ± 5% | |
| interneuron | 3 studies | 36% ± 20% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 4 studies | 38% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| breast | 100% | 1059.75 | 459 / 459 | 100% | 15.95 | 1118 / 1118 |
| esophagus | 100% | 1149.07 | 1445 / 1445 | 100% | 15.73 | 183 / 183 |
| intestine | 100% | 1031.27 | 966 / 966 | 100% | 11.16 | 527 / 527 |
| prostate | 100% | 1191.68 | 245 / 245 | 100% | 13.32 | 502 / 502 |
| stomach | 100% | 822.09 | 359 / 359 | 100% | 12.53 | 286 / 286 |
| uterus | 100% | 1148.01 | 170 / 170 | 100% | 11.69 | 459 / 459 |
| bladder | 100% | 1229.33 | 21 / 21 | 100% | 12.88 | 503 / 504 |
| ovary | 100% | 1029.42 | 180 / 180 | 100% | 11.20 | 429 / 430 |
| pancreas | 100% | 563.51 | 327 / 328 | 100% | 10.08 | 178 / 178 |
| skin | 100% | 1475.64 | 1809 / 1809 | 100% | 13.20 | 470 / 472 |
| thymus | 100% | 897.56 | 653 / 653 | 100% | 8.75 | 602 / 605 |
| lung | 99% | 900.96 | 575 / 578 | 100% | 12.45 | 1154 / 1155 |
| brain | 98% | 683.23 | 2585 / 2642 | 100% | 12.82 | 705 / 705 |
| liver | 100% | 462.13 | 226 / 226 | 98% | 5.65 | 397 / 406 |
| kidney | 100% | 663.88 | 89 / 89 | 97% | 7.84 | 874 / 901 |
| adrenal gland | 100% | 810.47 | 258 / 258 | 96% | 8.12 | 221 / 230 |
| adipose | 100% | 969.14 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 1012.19 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 9.18 | 29 / 29 |
| spleen | 100% | 977.90 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 11.07 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 7.83 | 1 / 1 |
| muscle | 99% | 630.85 | 798 / 803 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 99% | 7.36 | 79 / 80 |
| peripheral blood | 96% | 814.73 | 896 / 929 | 0% | 0 | 0 / 0 |
| heart | 96% | 512.57 | 827 / 861 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
| GO_0006355 | Biological process | regulation of DNA-templated transcription |
| GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
| GO_0005634 | Cellular component | nucleus |
| GO_0000977 | Molecular function | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO_0046872 | Molecular function | metal ion binding |
| Gene name | ZNF398 |
| Protein name | Zinc finger protein 398 Zinc finger protein 398 (Zinc finger DNA-binding protein p52/p71) |
| Synonyms | ZER6 KIAA1339 tcag7.488 hCG_16174 |
| Description | FUNCTION: Functions as a transcriptional activator. |
| Accessions | A0A090N7S8 ENST00000426851.6 [Q8TD17-2] ENST00000483892.5 [Q8TD17-2] Q8TD17 ENST00000475153.6 [Q8TD17-1] ENST00000491174.1 [Q8TD17-2] A0A090N8F2 |
