Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 10 studies | 26% ± 10% | |
oligodendrocyte precursor cell | 8 studies | 34% ± 15% | |
oligodendrocyte | 8 studies | 34% ± 11% | |
astrocyte | 7 studies | 34% ± 14% | |
interneuron | 6 studies | 37% ± 25% | |
glutamatergic neuron | 5 studies | 49% ± 23% | |
retina horizontal cell | 5 studies | 18% ± 2% | |
GABAergic neuron | 5 studies | 48% ± 16% | |
microglial cell | 4 studies | 24% ± 5% | |
epithelial cell | 4 studies | 28% ± 8% | |
amacrine cell | 4 studies | 22% ± 4% | |
fibroblast | 4 studies | 17% ± 2% | |
GABAergic interneuron | 3 studies | 26% ± 2% | |
macrophage | 3 studies | 23% ± 5% | |
neuron | 3 studies | 32% ± 13% | |
retinal cone cell | 3 studies | 20% ± 3% | |
rod bipolar cell | 3 studies | 19% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 2469.64 | 245 / 245 | 99% | 7.12 | 498 / 502 |
breast | 100% | 1720.86 | 459 / 459 | 99% | 10.57 | 1108 / 1118 |
thymus | 100% | 2686.67 | 653 / 653 | 97% | 6.35 | 587 / 605 |
esophagus | 100% | 1845.18 | 1441 / 1445 | 97% | 6.46 | 177 / 183 |
pancreas | 100% | 2204.85 | 327 / 328 | 97% | 4.76 | 172 / 178 |
brain | 100% | 2164.93 | 2637 / 2642 | 96% | 6.90 | 677 / 705 |
adrenal gland | 100% | 1955.25 | 258 / 258 | 93% | 6.31 | 214 / 230 |
uterus | 100% | 2629.59 | 170 / 170 | 93% | 5.46 | 427 / 459 |
stomach | 100% | 1932.25 | 359 / 359 | 93% | 5.58 | 266 / 286 |
ovary | 100% | 2401.09 | 180 / 180 | 93% | 5.79 | 398 / 430 |
lung | 100% | 1683.50 | 577 / 578 | 92% | 5.30 | 1065 / 1155 |
intestine | 100% | 2153.59 | 966 / 966 | 90% | 4.65 | 474 / 527 |
bladder | 100% | 1979.19 | 21 / 21 | 89% | 4.60 | 450 / 504 |
kidney | 100% | 1803.52 | 89 / 89 | 88% | 5.72 | 794 / 901 |
skin | 100% | 1661.35 | 1801 / 1809 | 87% | 5.48 | 409 / 472 |
liver | 100% | 1094.02 | 225 / 226 | 61% | 2.53 | 248 / 406 |
spleen | 100% | 2035.51 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.68 | 1 / 1 |
blood vessel | 100% | 1805.70 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 1670.33 | 1202 / 1204 | 0% | 0 | 0 / 0 |
muscle | 98% | 820.43 | 790 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 1093.03 | 844 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 5.23 | 42 / 45 |
lymph node | 0% | 0 | 0 / 0 | 79% | 4.56 | 23 / 29 |
eye | 0% | 0 | 0 / 0 | 59% | 2.58 | 47 / 80 |
peripheral blood | 35% | 767.05 | 322 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZNF37A |
Protein name | Zinc finger protein 37A Zinc finger protein 37A (Zinc finger protein KOX21) |
Synonyms | ZNF37 KOX21 |
Description | FUNCTION: May be involved in transcriptional regulation. |
Accessions | ENST00000638053.1 P17032 A0A1B0GVV4 ENST00000361085.9 ENST00000351773.7 ENST00000685332.1 |