Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 4 studies | 18% ± 2% | |
GABAergic neuron | 3 studies | 26% ± 7% | |
glutamatergic neuron | 3 studies | 27% ± 6% | |
astrocyte | 3 studies | 18% ± 2% | |
oligodendrocyte | 3 studies | 20% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 22% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 1111.78 | 245 / 245 | 100% | 5.50 | 502 / 502 |
brain | 100% | 800.57 | 2634 / 2642 | 99% | 5.60 | 701 / 705 |
breast | 100% | 1038.58 | 459 / 459 | 99% | 7.09 | 1106 / 1118 |
thymus | 100% | 1090.47 | 653 / 653 | 99% | 5.71 | 596 / 605 |
ovary | 100% | 1178.72 | 180 / 180 | 97% | 3.41 | 417 / 430 |
adrenal gland | 100% | 1100.93 | 258 / 258 | 96% | 4.10 | 220 / 230 |
pancreas | 99% | 483.00 | 326 / 328 | 96% | 3.80 | 170 / 178 |
kidney | 100% | 583.81 | 89 / 89 | 94% | 4.35 | 851 / 901 |
bladder | 100% | 1051.52 | 21 / 21 | 88% | 4.01 | 442 / 504 |
lung | 100% | 891.21 | 576 / 578 | 84% | 3.54 | 972 / 1155 |
stomach | 100% | 614.71 | 359 / 359 | 74% | 2.54 | 213 / 286 |
skin | 100% | 652.17 | 1808 / 1809 | 74% | 2.86 | 349 / 472 |
uterus | 100% | 1341.57 | 170 / 170 | 69% | 3.36 | 315 / 459 |
intestine | 100% | 826.37 | 966 / 966 | 60% | 1.74 | 318 / 527 |
esophagus | 100% | 780.11 | 1439 / 1445 | 61% | 2.39 | 111 / 183 |
adipose | 100% | 970.00 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 829.82 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 1538.65 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.85 | 1 / 1 |
heart | 100% | 568.90 | 860 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 93% | 2.92 | 27 / 29 |
muscle | 91% | 285.50 | 732 / 803 | 0% | 0 | 0 / 0 |
liver | 56% | 114.77 | 126 / 226 | 33% | 0.96 | 136 / 406 |
eye | 0% | 0 | 0 / 0 | 68% | 1.82 | 54 / 80 |
tonsil | 0% | 0 | 0 / 0 | 47% | 1.47 | 21 / 45 |
peripheral blood | 30% | 148.91 | 280 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZNF347 |
Protein name | Zinc finger protein 347 Zinc finger protein 347 (Zinc finger protein 1111) |
Synonyms | ZNF1111 |
Description | FUNCTION: May be involved in transcriptional regulation. |
Accessions | ENST00000599096.1 ENST00000601804.5 ENST00000601469.2 [Q96SE7-2] ENST00000334197.12 [Q96SE7-1] M0QZJ6 M0QXR8 ENST00000597183.5 M0QZE2 Q96SE7 ENST00000595967.1 ENST00000452676.6 [Q96SE7-2] M0R1E9 |