I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| oligodendrocyte | 10 studies | 25% ± 7% | |
| endothelial cell | 3 studies | 18% ± 1% | |
| GABAergic neuron | 3 studies | 27% ± 4% | |
| glutamatergic neuron | 3 studies | 43% ± 5% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| oligodendrocyte | 10 studies | 25% ± 7% | |
| endothelial cell | 3 studies | 18% ± 1% | |
| GABAergic neuron | 3 studies | 27% ± 4% | |
| glutamatergic neuron | 3 studies | 43% ± 5% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 5 studies | 32% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| prostate | 100% | 1878.59 | 245 / 245 | 100% | 31.86 | 502 / 502 |
| brain | 100% | 1895.23 | 2641 / 2642 | 100% | 34.36 | 705 / 705 |
| breast | 100% | 1402.91 | 459 / 459 | 100% | 27.38 | 1116 / 1118 |
| adrenal gland | 100% | 2991.98 | 258 / 258 | 100% | 39.70 | 229 / 230 |
| pancreas | 100% | 2432.36 | 328 / 328 | 99% | 29.34 | 177 / 178 |
| thymus | 100% | 1497.56 | 653 / 653 | 99% | 24.47 | 601 / 605 |
| lung | 99% | 1078.88 | 575 / 578 | 99% | 21.20 | 1149 / 1155 |
| kidney | 100% | 1394.93 | 89 / 89 | 98% | 41.84 | 885 / 901 |
| uterus | 100% | 1632.59 | 170 / 170 | 98% | 17.99 | 449 / 459 |
| stomach | 100% | 1188.97 | 359 / 359 | 98% | 19.17 | 279 / 286 |
| esophagus | 99% | 1019.64 | 1432 / 1445 | 98% | 21.58 | 180 / 183 |
| intestine | 100% | 1505.47 | 966 / 966 | 97% | 19.34 | 510 / 527 |
| bladder | 100% | 1164.14 | 21 / 21 | 96% | 14.75 | 484 / 504 |
| liver | 100% | 1071.38 | 226 / 226 | 96% | 19.16 | 388 / 406 |
| ovary | 100% | 1555.82 | 180 / 180 | 95% | 13.60 | 407 / 430 |
| skin | 97% | 893.84 | 1760 / 1809 | 93% | 17.79 | 440 / 472 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 16.71 | 29 / 29 |
| muscle | 100% | 1383.37 | 803 / 803 | 0% | 0 | 0 / 0 |
| spleen | 100% | 1667.28 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 18.19 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 5.21 | 1 / 1 |
| adipose | 100% | 1410.46 | 1203 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 977.06 | 1331 / 1335 | 0% | 0 | 0 / 0 |
| heart | 98% | 1442.14 | 846 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 89% | 11.07 | 71 / 80 |
| peripheral blood | 52% | 466.95 | 487 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
| GO_0005634 | Cellular component | nucleus |
| GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO_0046872 | Molecular function | metal ion binding |
| Gene name | ZNF189 |
| Protein name | Zinc finger protein 189 ZNF189 protein |
| Synonyms | |
| Description | FUNCTION: May be involved in transcriptional regulation. |
| Accessions | ENST00000615466.1 A0A087X0K2 ENST00000374861.7 [O75820-2] B7ZLK9 O75820 ENST00000339664.7 [O75820-1] ENST00000259395.4 [O75820-4] |
