Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 7 studies | 23% ± 7% | |
endothelial cell | 5 studies | 20% ± 3% | |
epithelial cell | 5 studies | 34% ± 10% | |
oligodendrocyte | 4 studies | 16% ± 1% | |
renal alpha-intercalated cell | 3 studies | 43% ± 1% | |
macrophage | 3 studies | 18% ± 4% | |
GABAergic neuron | 3 studies | 26% ± 7% | |
glutamatergic neuron | 3 studies | 36% ± 8% | |
dendritic cell | 3 studies | 21% ± 3% | |
plasmacytoid dendritic cell | 3 studies | 20% ± 3% | |
astrocyte | 3 studies | 21% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 2598.25 | 459 / 459 | 100% | 97.39 | 1118 / 1118 |
esophagus | 100% | 2983.03 | 1445 / 1445 | 100% | 66.65 | 183 / 183 |
liver | 100% | 1954.27 | 226 / 226 | 100% | 46.49 | 406 / 406 |
ovary | 100% | 2100.14 | 180 / 180 | 100% | 57.99 | 430 / 430 |
prostate | 100% | 2382.98 | 245 / 245 | 100% | 107.06 | 502 / 502 |
uterus | 100% | 3709.06 | 170 / 170 | 100% | 62.07 | 459 / 459 |
brain | 100% | 1757.16 | 2636 / 2642 | 100% | 53.27 | 705 / 705 |
lung | 100% | 2284.53 | 576 / 578 | 100% | 67.32 | 1155 / 1155 |
bladder | 100% | 2838.24 | 21 / 21 | 99% | 63.62 | 501 / 504 |
stomach | 100% | 2219.52 | 359 / 359 | 99% | 59.74 | 284 / 286 |
thymus | 100% | 2292.21 | 653 / 653 | 99% | 45.60 | 600 / 605 |
intestine | 100% | 2904.85 | 966 / 966 | 99% | 60.07 | 522 / 527 |
kidney | 100% | 2522.65 | 89 / 89 | 99% | 59.12 | 892 / 901 |
pancreas | 99% | 1295.33 | 324 / 328 | 99% | 57.05 | 176 / 178 |
skin | 100% | 2960.65 | 1808 / 1809 | 97% | 59.03 | 460 / 472 |
adrenal gland | 100% | 3140.73 | 258 / 258 | 97% | 34.76 | 222 / 230 |
adipose | 100% | 2649.40 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3631.24 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 37.81 | 29 / 29 |
spleen | 100% | 1545.10 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 53.36 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 36.32 | 1 / 1 |
muscle | 99% | 1443.86 | 792 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 1854.69 | 843 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 36.35 | 75 / 80 |
peripheral blood | 81% | 1719.46 | 757 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007628 | Biological process | adult walking behavior |
GO_0060307 | Biological process | regulation of ventricular cardiac muscle cell membrane repolarization |
GO_0006281 | Biological process | DNA repair |
GO_0030327 | Biological process | prenylated protein catabolic process |
GO_0003417 | Biological process | growth plate cartilage development |
GO_2000772 | Biological process | regulation of cellular senescence |
GO_0006998 | Biological process | nuclear envelope organization |
GO_0061762 | Biological process | CAMKK-AMPK signaling cascade |
GO_0043516 | Biological process | regulation of DNA damage response, signal transduction by p53 class mediator |
GO_0008340 | Biological process | determination of adult lifespan |
GO_0048145 | Biological process | regulation of fibroblast proliferation |
GO_0055013 | Biological process | cardiac muscle cell development |
GO_0032350 | Biological process | regulation of hormone metabolic process |
GO_0030500 | Biological process | regulation of bone mineralization |
GO_0019216 | Biological process | regulation of lipid metabolic process |
GO_0010906 | Biological process | regulation of glucose metabolic process |
GO_0001889 | Biological process | liver development |
GO_0035264 | Biological process | multicellular organism growth |
GO_0040014 | Biological process | regulation of multicellular organism growth |
GO_0050905 | Biological process | neuromuscular process |
GO_0071480 | Biological process | cellular response to gamma radiation |
GO_1990036 | Biological process | calcium ion import into sarcoplasmic reticulum |
GO_1903799 | Biological process | negative regulation of miRNA processing |
GO_0044255 | Biological process | cellular lipid metabolic process |
GO_0003231 | Biological process | cardiac ventricle development |
GO_0010506 | Biological process | regulation of autophagy |
GO_0048538 | Biological process | thymus development |
GO_0006508 | Biological process | proteolysis |
GO_0030282 | Biological process | bone mineralization |
GO_0061337 | Biological process | cardiac conduction |
GO_0001942 | Biological process | hair follicle development |
GO_0044029 | Biological process | positive regulation of gene expression via chromosomal CpG island demethylation |
GO_1903463 | Biological process | regulation of mitotic cell cycle DNA replication |
GO_0003229 | Biological process | ventricular cardiac muscle tissue development |
GO_0071586 | Biological process | CAAX-box protein processing |
GO_0006925 | Biological process | inflammatory cell apoptotic process |
GO_0008360 | Biological process | regulation of cell shape |
GO_0060993 | Biological process | kidney morphogenesis |
GO_0072423 | Biological process | response to DNA damage checkpoint signaling |
GO_0043007 | Biological process | maintenance of rDNA |
GO_0050688 | Biological process | regulation of defense response to virus |
GO_0070302 | Biological process | regulation of stress-activated protein kinase signaling cascade |
GO_2000730 | Biological process | regulation of termination of RNA polymerase I transcription |
GO_0032006 | Biological process | regulation of TOR signaling |
GO_0003007 | Biological process | heart morphogenesis |
GO_0051604 | Biological process | protein maturation |
GO_0031902 | Cellular component | late endosome membrane |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0031901 | Cellular component | early endosome membrane |
GO_0032991 | Cellular component | protein-containing complex |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005637 | Cellular component | nuclear inner membrane |
GO_0004175 | Molecular function | endopeptidase activity |
GO_0003690 | Molecular function | double-stranded DNA binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0004222 | Molecular function | metalloendopeptidase activity |
GO_0008235 | Molecular function | metalloexopeptidase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | ZMPSTE24 |
Protein name | Zinc metallopeptidase STE24 CAAX prenyl protease 1 homolog (EC 3.4.24.84) (Farnesylated proteins-converting enzyme 1) (FACE-1) (Prenyl protein-specific endoprotease 1) (Zinc metalloproteinase Ste24 homolog) CAAX prenyl protease (EC 3.4.24.84) |
Synonyms | STE24 FACE1 |
Description | FUNCTION: Transmembrane metalloprotease whose catalytic activity is critical for processing lamin A/LMNA on the inner nuclear membrane and clearing clogged translocons on the endoplasmic reticulum . Proteolytically removes the C-terminal three residues of farnesylated proteins . Plays also an antiviral role independently of its protease activity by restricting enveloped RNA and DNA viruses, including influenza A, Zika, Ebola, Sindbis, vesicular stomatitis, cowpox, and vaccinia . Mechanistically, controls IFITM antiviral pathway to hinder viruses from breaching the endosomal barrier by modulating membrane fluidity . . FUNCTION: Proteolytically removes the C-terminal three residues of farnesylated proteins. . |
Accessions | ENST00000675937.1 A0A6Q8PH40 A0A6Q8PHG9 ENST00000675754.1 O75844 ENST00000372759.4 A0A6Q8PF67 ENST00000674703.1 |