Name | Number of supported studies | Average coverage | |
---|---|---|---|
GABAergic neuron | 4 studies | 37% ± 14% | |
glutamatergic neuron | 4 studies | 43% ± 13% | |
interneuron | 3 studies | 46% ± 20% | |
astrocyte | 3 studies | 27% ± 6% | |
oligodendrocyte | 3 studies | 22% ± 5% | |
oligodendrocyte precursor cell | 3 studies | 27% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 32% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 629.39 | 2639 / 2642 | 100% | 8.96 | 705 / 705 |
breast | 100% | 520.09 | 459 / 459 | 99% | 8.45 | 1111 / 1118 |
thymus | 100% | 602.15 | 653 / 653 | 99% | 4.93 | 601 / 605 |
prostate | 100% | 525.20 | 245 / 245 | 99% | 4.87 | 498 / 502 |
ovary | 100% | 654.89 | 180 / 180 | 99% | 4.23 | 424 / 430 |
adrenal gland | 100% | 490.18 | 258 / 258 | 97% | 4.66 | 224 / 230 |
kidney | 100% | 349.62 | 89 / 89 | 95% | 3.88 | 857 / 901 |
bladder | 100% | 527.24 | 21 / 21 | 95% | 4.31 | 477 / 504 |
lung | 99% | 386.09 | 571 / 578 | 95% | 4.55 | 1095 / 1155 |
pancreas | 97% | 223.23 | 318 / 328 | 93% | 3.25 | 166 / 178 |
uterus | 100% | 687.95 | 170 / 170 | 87% | 4.44 | 398 / 459 |
stomach | 100% | 321.00 | 358 / 359 | 87% | 3.44 | 248 / 286 |
intestine | 100% | 502.12 | 966 / 966 | 86% | 3.29 | 453 / 527 |
skin | 100% | 535.83 | 1806 / 1809 | 81% | 3.37 | 380 / 472 |
esophagus | 100% | 499.02 | 1444 / 1445 | 70% | 2.67 | 128 / 183 |
liver | 95% | 178.78 | 214 / 226 | 60% | 1.61 | 245 / 406 |
spleen | 100% | 425.97 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.60 | 1 / 1 |
blood vessel | 100% | 458.75 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 448.50 | 1203 / 1204 | 0% | 0 | 0 / 0 |
muscle | 97% | 224.82 | 780 / 803 | 0% | 0 | 0 / 0 |
heart | 95% | 244.05 | 821 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 87% | 2.94 | 39 / 45 |
lymph node | 0% | 0 | 0 / 0 | 86% | 2.38 | 25 / 29 |
eye | 0% | 0 | 0 / 0 | 49% | 1.18 | 39 / 80 |
peripheral blood | 35% | 219.11 | 322 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZFP30 |
Protein name | HCG42405, isoform CRA_a (Zinc finger protein 30) ZFP30 zinc finger protein Zinc finger protein 30 homolog (Zfp-30) (Zinc finger protein 745) |
Synonyms | hCG_42405 KIAA0961 ZNF745 |
Description | FUNCTION: May be involved in transcriptional regulation. FUNCTION: May be involved in transcriptional regulation. . |
Accessions | ENST00000684514.1 K7EMM3 ENST00000587809.5 ENST00000589018.5 ENST00000588979.5 K7EPH5 ENST00000351218.6 Q9Y2G7 D3Y2A0 ENST00000514101.6 K7EK76 |