Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 8 studies | 29% ± 10% | |
interneuron | 6 studies | 34% ± 17% | |
oligodendrocyte | 6 studies | 23% ± 6% | |
endothelial cell | 5 studies | 26% ± 14% | |
GABAergic neuron | 5 studies | 40% ± 14% | |
astrocyte | 5 studies | 24% ± 8% | |
neuron | 4 studies | 32% ± 8% | |
glutamatergic neuron | 4 studies | 53% ± 11% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 8 studies | 31% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 689.75 | 2641 / 2642 | 99% | 17.26 | 700 / 705 |
adrenal gland | 100% | 720.25 | 258 / 258 | 96% | 8.27 | 220 / 230 |
pancreas | 97% | 247.06 | 319 / 328 | 96% | 6.19 | 171 / 178 |
kidney | 100% | 568.88 | 89 / 89 | 93% | 6.43 | 840 / 901 |
thymus | 100% | 705.08 | 653 / 653 | 93% | 6.73 | 562 / 605 |
stomach | 100% | 622.51 | 359 / 359 | 90% | 6.20 | 258 / 286 |
intestine | 100% | 915.05 | 966 / 966 | 90% | 5.72 | 474 / 527 |
prostate | 100% | 718.50 | 244 / 245 | 87% | 5.49 | 435 / 502 |
bladder | 100% | 657.90 | 21 / 21 | 76% | 5.72 | 385 / 504 |
liver | 98% | 343.53 | 222 / 226 | 73% | 3.81 | 298 / 406 |
ovary | 100% | 939.98 | 180 / 180 | 70% | 5.11 | 299 / 430 |
breast | 100% | 546.62 | 459 / 459 | 68% | 4.35 | 755 / 1118 |
esophagus | 100% | 687.62 | 1444 / 1445 | 58% | 3.24 | 106 / 183 |
lung | 100% | 460.24 | 576 / 578 | 55% | 2.86 | 640 / 1155 |
uterus | 100% | 926.87 | 170 / 170 | 37% | 4.22 | 169 / 459 |
skin | 100% | 463.90 | 1807 / 1809 | 35% | 1.97 | 163 / 472 |
spleen | 100% | 551.15 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.61 | 1 / 1 |
blood vessel | 100% | 727.28 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 519.79 | 1202 / 1204 | 0% | 0 | 0 / 0 |
heart | 94% | 386.75 | 812 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 86% | 4.43 | 25 / 29 |
peripheral blood | 61% | 235.84 | 563 / 929 | 0% | 0 | 0 / 0 |
muscle | 56% | 95.03 | 453 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 25% | 0.90 | 20 / 80 |
tonsil | 0% | 0 | 0 / 0 | 4% | 0.23 | 2 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0045666 | Biological process | positive regulation of neuron differentiation |
GO_0003358 | Biological process | noradrenergic neuron development |
GO_0006513 | Biological process | protein monoubiquitination |
GO_2000677 | Biological process | regulation of transcription regulatory region DNA binding |
GO_0021522 | Biological process | spinal cord motor neuron differentiation |
GO_0051091 | Biological process | positive regulation of DNA-binding transcription factor activity |
GO_0007399 | Biological process | nervous system development |
GO_0007528 | Biological process | neuromuscular junction development |
GO_0032991 | Cellular component | protein-containing complex |
GO_0043025 | Cellular component | neuronal cell body |
GO_0005737 | Cellular component | cytoplasm |
GO_0045211 | Cellular component | postsynaptic membrane |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZC4H2 |
Protein name | Zinc finger C4H2-type containing Zinc finger C4H2 domain-containing protein (Hepatocellular carcinoma-associated antigen 127) |
Synonyms | KIAA1166 HCA127 |
Description | FUNCTION: Plays a role in interneurons differentiation . Involved in neuronal development and in neuromuscular junction formation. . |
Accessions | ENST00000492653.6 ENST00000337990.2 [Q9NQZ6-3] ENST00000447788.6 [Q9NQZ6-4] ENST00000488608.5 [Q9NQZ6-2] A0A8V8TQM8 ENST00000703136.1 Q9NQZ6 ENST00000476032.2 ENST00000374839.8 [Q9NQZ6-1] ENST00000703133.1 A0A8V8TR70 A0A8V8TQN6 |