Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 3 studies | 29% ± 6% | |
ciliated cell | 3 studies | 17% ± 2% | |
glutamatergic neuron | 3 studies | 27% ± 7% | |
dendritic cell | 3 studies | 16% ± 0% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 20% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1326.59 | 1445 / 1445 | 100% | 37.80 | 183 / 183 |
liver | 100% | 1614.36 | 226 / 226 | 100% | 54.34 | 406 / 406 |
lung | 100% | 1457.75 | 578 / 578 | 100% | 57.52 | 1155 / 1155 |
prostate | 100% | 2606.71 | 245 / 245 | 100% | 175.36 | 502 / 502 |
stomach | 100% | 1463.91 | 359 / 359 | 100% | 41.28 | 286 / 286 |
breast | 100% | 1759.25 | 459 / 459 | 100% | 99.85 | 1117 / 1118 |
thymus | 100% | 2569.89 | 653 / 653 | 100% | 69.49 | 604 / 605 |
skin | 100% | 1539.74 | 1809 / 1809 | 100% | 54.99 | 471 / 472 |
ovary | 100% | 1072.26 | 180 / 180 | 100% | 48.13 | 429 / 430 |
kidney | 100% | 1679.46 | 89 / 89 | 100% | 44.65 | 897 / 901 |
bladder | 100% | 1491.48 | 21 / 21 | 99% | 55.33 | 501 / 504 |
uterus | 100% | 1124.99 | 170 / 170 | 99% | 59.61 | 456 / 459 |
brain | 99% | 1000.66 | 2626 / 2642 | 100% | 40.52 | 704 / 705 |
intestine | 100% | 1282.30 | 966 / 966 | 99% | 44.35 | 523 / 527 |
pancreas | 99% | 928.88 | 326 / 328 | 99% | 53.41 | 177 / 178 |
adrenal gland | 100% | 2021.53 | 258 / 258 | 96% | 36.55 | 220 / 230 |
adipose | 100% | 1353.26 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 51.59 | 29 / 29 |
muscle | 100% | 1305.90 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1684.97 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 52.14 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 34.71 | 1 / 1 |
blood vessel | 100% | 1271.92 | 1333 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 100% | 3313.48 | 927 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 40.94 | 78 / 80 |
heart | 96% | 837.36 | 826 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016192 | Biological process | vesicle-mediated transport |
GO_0000138 | Cellular component | Golgi trans cisterna |
GO_0005802 | Cellular component | trans-Golgi network |
GO_0031902 | Cellular component | late endosome membrane |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005886 | Cellular component | plasma membrane |
GO_0005797 | Cellular component | Golgi medial cisterna |
GO_0030133 | Cellular component | transport vesicle |
GO_0005515 | Molecular function | protein binding |
GO_0031267 | Molecular function | small GTPase binding |
Gene name | YIPF1 |
Protein name | Protein YIPF1 (YIP1 family member 1) Alternative protein YIPF1 |
Synonyms | |
Description | |
Accessions | ENST00000072644.7 [Q9Y548-1] L8ECI1 Q9Y548 ENST00000464950.6 [Q9Y548-1] ENST00000371399.5 [Q9Y548-2] |