Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| ciliated cell | 13 studies | 31% ± 10% | |
| glutamatergic neuron | 8 studies | 41% ± 27% | |
| GABAergic neuron | 7 studies | 44% ± 22% | |
| endothelial cell | 5 studies | 28% ± 10% | |
| astrocyte | 5 studies | 32% ± 11% | |
| interneuron | 5 studies | 44% ± 26% | |
| epithelial cell | 4 studies | 22% ± 5% | |
| GABAergic interneuron | 3 studies | 25% ± 4% | |
| neuron | 3 studies | 23% ± 7% | |
| ependymal cell | 3 studies | 44% ± 8% | |
| fibroblast | 3 studies | 25% ± 13% | |
| adipocyte | 3 studies | 23% ± 3% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 9 studies | 33% ± 21% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| thymus | 100% | 5417.55 | 653 / 653 | 100% | 15.40 | 603 / 605 |
| prostate | 100% | 2706.93 | 245 / 245 | 99% | 8.42 | 498 / 502 |
| breast | 100% | 3033.15 | 459 / 459 | 99% | 11.98 | 1105 / 1118 |
| adrenal gland | 100% | 2321.06 | 258 / 258 | 99% | 10.44 | 227 / 230 |
| ovary | 100% | 5340.33 | 180 / 180 | 97% | 8.55 | 419 / 430 |
| skin | 100% | 2159.22 | 1808 / 1809 | 97% | 10.74 | 460 / 472 |
| esophagus | 99% | 2264.12 | 1435 / 1445 | 98% | 6.51 | 179 / 183 |
| brain | 97% | 2074.77 | 2560 / 2642 | 100% | 15.15 | 704 / 705 |
| lung | 99% | 2739.28 | 575 / 578 | 97% | 6.80 | 1118 / 1155 |
| kidney | 100% | 2251.28 | 89 / 89 | 94% | 11.18 | 850 / 901 |
| uterus | 100% | 4606.94 | 170 / 170 | 94% | 7.55 | 433 / 459 |
| pancreas | 96% | 1199.28 | 316 / 328 | 98% | 7.64 | 174 / 178 |
| bladder | 100% | 2551.24 | 21 / 21 | 94% | 5.66 | 473 / 504 |
| stomach | 99% | 2077.11 | 357 / 359 | 94% | 4.69 | 268 / 286 |
| intestine | 99% | 2328.54 | 955 / 966 | 91% | 4.29 | 479 / 527 |
| liver | 99% | 1397.28 | 224 / 226 | 89% | 5.06 | 363 / 406 |
| adipose | 100% | 2793.97 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| spleen | 100% | 1509.57 | 241 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 4.05 | 1 / 1 |
| blood vessel | 100% | 2990.71 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 90% | 6.18 | 72 / 80 |
| lymph node | 0% | 0 | 0 / 0 | 90% | 4.89 | 26 / 29 |
| tonsil | 0% | 0 | 0 / 0 | 89% | 5.99 | 40 / 45 |
| heart | 88% | 1011.75 | 758 / 861 | 0% | 0 | 0 / 0 |
| muscle | 59% | 497.35 | 474 / 803 | 0% | 0 | 0 / 0 |
| peripheral blood | 21% | 212.63 | 194 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0060271 | Biological process | cilium assembly |
| GO_0008406 | Biological process | gonad development |
| GO_0060831 | Biological process | smoothened signaling pathway involved in dorsal/ventral neural tube patterning |
| GO_0001701 | Biological process | in utero embryonic development |
| GO_0035721 | Biological process | intraciliary retrograde transport |
| GO_0065003 | Biological process | protein-containing complex assembly |
| GO_0043113 | Biological process | receptor clustering |
| GO_0055123 | Biological process | digestive system development |
| GO_0030326 | Biological process | embryonic limb morphogenesis |
| GO_0031076 | Biological process | embryonic camera-type eye development |
| GO_0048701 | Biological process | embryonic cranial skeleton morphogenesis |
| GO_0000902 | Biological process | cell morphogenesis |
| GO_0061055 | Biological process | myotome development |
| GO_0050877 | Biological process | nervous system process |
| GO_1903441 | Biological process | protein localization to ciliary membrane |
| GO_0042471 | Biological process | ear morphogenesis |
| GO_0005856 | Cellular component | cytoskeleton |
| GO_0032391 | Cellular component | photoreceptor connecting cilium |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0001750 | Cellular component | photoreceptor outer segment |
| GO_0031514 | Cellular component | motile cilium |
| GO_0097542 | Cellular component | ciliary tip |
| GO_0030991 | Cellular component | intraciliary transport particle A |
| GO_0097730 | Cellular component | non-motile cilium |
| GO_0005929 | Cellular component | cilium |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0005515 | Molecular function | protein binding |
| Gene name | WDR19 |
| Protein name | WD repeat domain 19 WD repeat-containing protein 19 (Intraflagellar transport 144 homolog) |
| Synonyms | hCG_38548 KIAA1638 IFT144 |
| Description | FUNCTION: As component of the IFT complex A (IFT-A), a complex required for retrograde ciliary transport and entry into cilia of G protein-coupled receptors (GPCRs), it is involved in cilia function and/or assembly . Essential for functional IFT-A assembly and ciliary entry of GPCRs . Associates with the BBSome complex to mediate ciliary transport (By similarity). . |
| Accessions | ENST00000509560.5 ENST00000512112.5 D6RIE4 ENST00000505055.5 ENST00000399820.8 [Q8NEZ3-1] D6RCF7 ENST00000507228.1 ENST00000506503.1 ENST00000506869.5 ENST00000503697.5 D6RE75 H0Y8K9 D6RBA0 D6RAI4 Q8NEZ3 D6R9P6 |
