Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| epithelial cell | 6 studies | 28% ± 10% | |
| GABAergic neuron | 5 studies | 34% ± 15% | |
| endothelial cell | 4 studies | 19% ± 2% | |
| glutamatergic neuron | 4 studies | 46% ± 13% | |
| astrocyte | 4 studies | 30% ± 11% | |
| oligodendrocyte | 4 studies | 24% ± 7% | |
| ciliated cell | 3 studies | 16% ± 1% | |
| transit amplifying cell | 3 studies | 22% ± 4% | |
| interneuron | 3 studies | 44% ± 16% | |
| adipocyte | 3 studies | 23% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 1134.28 | 1444 / 1445 | 100% | 12.54 | 183 / 183 |
| breast | 100% | 1163.59 | 459 / 459 | 100% | 12.46 | 1116 / 1118 |
| stomach | 100% | 956.41 | 359 / 359 | 100% | 14.62 | 285 / 286 |
| intestine | 100% | 1129.20 | 966 / 966 | 99% | 16.38 | 524 / 527 |
| brain | 99% | 1123.42 | 2626 / 2642 | 100% | 13.12 | 704 / 705 |
| ovary | 100% | 1158.22 | 180 / 180 | 99% | 10.77 | 426 / 430 |
| bladder | 100% | 1228.24 | 21 / 21 | 99% | 12.53 | 499 / 504 |
| uterus | 100% | 1278.90 | 170 / 170 | 99% | 11.80 | 454 / 459 |
| prostate | 100% | 929.73 | 245 / 245 | 99% | 9.26 | 496 / 502 |
| thymus | 100% | 1020.77 | 653 / 653 | 98% | 7.73 | 590 / 605 |
| skin | 100% | 1860.76 | 1809 / 1809 | 97% | 16.90 | 460 / 472 |
| lung | 97% | 929.60 | 560 / 578 | 100% | 12.83 | 1154 / 1155 |
| pancreas | 98% | 669.83 | 322 / 328 | 98% | 8.31 | 175 / 178 |
| liver | 100% | 902.12 | 226 / 226 | 95% | 7.68 | 385 / 406 |
| kidney | 100% | 1129.20 | 89 / 89 | 95% | 8.86 | 852 / 901 |
| adrenal gland | 100% | 1850.34 | 258 / 258 | 93% | 9.70 | 214 / 230 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 12.15 | 29 / 29 |
| muscle | 100% | 1442.05 | 803 / 803 | 0% | 0 | 0 / 0 |
| spleen | 100% | 1095.15 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 11.74 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 5.46 | 1 / 1 |
| adipose | 100% | 1212.03 | 1203 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 849.96 | 1331 / 1335 | 0% | 0 | 0 / 0 |
| heart | 95% | 1093.50 | 821 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 91% | 9.95 | 73 / 80 |
| peripheral blood | 57% | 942.89 | 528 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0000463 | Biological process | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| GO_0042273 | Biological process | ribosomal large subunit biogenesis |
| GO_0007219 | Biological process | Notch signaling pathway |
| GO_0000466 | Biological process | maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| GO_0051726 | Biological process | regulation of cell cycle |
| GO_0030687 | Cellular component | preribosome, large subunit precursor |
| GO_0005730 | Cellular component | nucleolus |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0070545 | Cellular component | PeBoW complex |
| GO_0043021 | Molecular function | ribonucleoprotein complex binding |
| GO_0005515 | Molecular function | protein binding |
| Gene name | WDR12 |
| Protein name | Ribosome biogenesis protein WDR12 (WD repeat-containing protein 12) |
| Synonyms | hCG_1779944 |
| Description | FUNCTION: Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. . FUNCTION: Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. . |
| Accessions | Q53T99 ENST00000261015.5 ENST00000688520.1 Q9GZL7 |
