Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 6 studies | 25% ± 8% | |
oligodendrocyte precursor cell | 5 studies | 36% ± 12% | |
glutamatergic neuron | 3 studies | 30% ± 9% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 27% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 6675.84 | 2631 / 2642 | 62% | 1.34 | 440 / 705 |
liver | 81% | 999.82 | 184 / 226 | 0% | 0 | 0 / 406 |
prostate | 68% | 480.19 | 166 / 245 | 0% | 0.00 | 1 / 502 |
blood vessel | 64% | 499.75 | 850 / 1335 | 0% | 0 | 0 / 0 |
ovary | 44% | 323.47 | 79 / 180 | 0% | 0 | 0 / 430 |
bladder | 43% | 339.43 | 9 / 21 | 1% | 0.01 | 3 / 504 |
esophagus | 40% | 368.84 | 585 / 1445 | 1% | 0.01 | 1 / 183 |
stomach | 41% | 351.47 | 146 / 359 | 0% | 0 | 0 / 286 |
intestine | 40% | 290.34 | 391 / 966 | 0% | 0 | 0 / 527 |
breast | 31% | 204.00 | 143 / 459 | 6% | 0.12 | 63 / 1118 |
kidney | 35% | 204.16 | 31 / 89 | 1% | 0.01 | 5 / 901 |
muscle | 26% | 152.48 | 208 / 803 | 0% | 0 | 0 / 0 |
adipose | 24% | 149.65 | 286 / 1204 | 0% | 0 | 0 / 0 |
lung | 23% | 151.09 | 131 / 578 | 0% | 0.01 | 5 / 1155 |
heart | 23% | 130.49 | 197 / 861 | 0% | 0 | 0 / 0 |
uterus | 20% | 116.70 | 34 / 170 | 0% | 0.01 | 2 / 459 |
thymus | 16% | 94.56 | 102 / 653 | 0% | 0 | 0 / 605 |
skin | 3% | 16.07 | 58 / 1809 | 10% | 0.19 | 48 / 472 |
adrenal gland | 11% | 56.30 | 28 / 258 | 0% | 0 | 0 / 230 |
pancreas | 9% | 46.19 | 29 / 328 | 0% | 0 | 0 / 178 |
spleen | 2% | 10.63 | 5 / 241 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 1% | 0.02 | 1 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0030182 | Biological process | neuron differentiation |
GO_0022008 | Biological process | neurogenesis |
GO_0005886 | Cellular component | plasma membrane |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | VXN |
Protein name | Vexin |
Synonyms | C8orf46 |
Description | FUNCTION: Required for neurogenesis in the neural plate and retina. Strongly cooperates with neural bHLH factors to promote neurogenesis. . |
Accessions | E5RH60 ENST00000460144.5 E5RJS6 ENST00000699189.1 [Q8TAG6-1] E5RKA6 ENST00000521495.5 ENST00000305454.8 [Q8TAG6-1] R4GNJ7 Q8TAG6 ENST00000480005.1 ENST00000450307.7 ENST00000522977.5 [Q8TAG6-2] |