VWDE report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
glutamatergic neuron	3 studies	25% ± 5%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	100%	443.62	652 / 653	70%	2.81	421 / 605
prostate	98%	248.56	239 / 245	47%	1.30	237 / 502
pancreas	81%	56.86	266 / 328	48%	1.61	85 / 178
lung	70%	49.53	402 / 578	51%	2.50	588 / 1155
breast	63%	186.30	290 / 459	40%	1.43	452 / 1118
bladder	57%	52.43	12 / 21	36%	1.22	180 / 504
uterus	65%	54.25	110 / 170	26%	1.03	120 / 459
adrenal gland	32%	22.73	83 / 258	55%	2.68	126 / 230
kidney	64%	42.75	57 / 89	23%	0.75	205 / 901
ovary	31%	22.24	56 / 180	49%	1.38	210 / 430
intestine	61%	54.37	592 / 966	12%	0.37	62 / 527
skin	56%	38.60	1021 / 1809	4%	0.16	20 / 472
esophagus	35%	25.02	506 / 1445	25%	1.02	46 / 183
stomach	46%	22.09	166 / 359	10%	0.26	29 / 286
heart	49%	260.80	419 / 861	0%	0	0 / 0
spleen	44%	20.81	106 / 241	0%	0	0 / 0
brain	41%	29.21	1077 / 2642	2%	0.05	15 / 705
liver	28%	13.99	63 / 226	9%	0.35	38 / 406
tonsil	0%	0	0 / 0	20%	0.66	9 / 45
peripheral blood	12%	5.32	110 / 929	0%	0	0 / 0
blood vessel	6%	4.28	80 / 1335	0%	0	0 / 0
adipose	4%	2.67	49 / 1204	0%	0	0 / 0
muscle	1%	0.70	6 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1