VSTM2L report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	11 studies	36% ± 13%	Explore
GABAergic neuron	6 studies	33% ± 16%	Explore
glutamatergic neuron	5 studies	28% ± 13%	Explore
neuron	3 studies	26% ± 5%	Explore
retinal ganglion cell	3 studies	46% ± 21%	Explore
interneuron	3 studies	23% ± 3%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	6 studies	23% ± 11%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	78%	768.18	190 / 245	99%	249.50	496 / 502
brain	95%	3646.99	2520 / 2642	71%	34.52	499 / 705
lung	89%	1027.99	512 / 578	56%	65.75	642 / 1155
adrenal gland	38%	227.00	98 / 258	78%	83.92	179 / 230
spleen	100%	2528.67	241 / 241	0%	0	0 / 0
pancreas	8%	37.09	25 / 328	81%	109.99	145 / 178
stomach	67%	351.82	241 / 359	20%	11.77	58 / 286
heart	86%	2923.85	737 / 861	0%	0	0 / 0
thymus	16%	71.02	102 / 653	60%	19.78	366 / 605
eye	0%	0	0 / 0	66%	15.42	53 / 80
esophagus	49%	394.13	706 / 1445	16%	5.15	30 / 183
intestine	29%	116.99	276 / 966	20%	9.34	104 / 527
ovary	2%	9.67	3 / 180	40%	23.46	172 / 430
skin	8%	33.16	147 / 1809	31%	10.61	144 / 472
uterus	11%	79.71	18 / 170	25%	12.82	116 / 459
kidney	10%	42.00	9 / 89	22%	20.76	201 / 901
liver	10%	42.42	23 / 226	17%	6.24	70 / 406
tonsil	0%	0	0 / 0	27%	10.25	12 / 45
breast	1%	9.20	5 / 459	24%	8.63	267 / 1118
bladder	0%	0	0 / 21	21%	15.72	104 / 504
lymph node	0%	0	0 / 0	10%	2.05	3 / 29
muscle	4%	26.06	35 / 803	0%	0	0 / 0
adipose	1%	3.51	10 / 1204	0%	0	0 / 0
blood vessel	1%	5.00	11 / 1335	0%	0	0 / 0
peripheral blood	0%	1.27	1 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1