Insufficient scRNA-seq data for expression of VSIG1 at single-cell level.
Insufficient scRNA-seq data for expression of VSIG1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 78% | 60.72 | 451 / 578 | 70% | 37.77 | 809 / 1155 |
stomach | 91% | 9055.14 | 326 / 359 | 56% | 47.19 | 159 / 286 |
pancreas | 23% | 17.10 | 77 / 328 | 82% | 48.56 | 146 / 178 |
esophagus | 31% | 17.50 | 450 / 1445 | 74% | 43.72 | 135 / 183 |
bladder | 67% | 175.33 | 14 / 21 | 38% | 3.44 | 190 / 504 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.38 | 1 / 1 |
spleen | 85% | 31.09 | 206 / 241 | 0% | 0 | 0 / 0 |
skin | 79% | 32.65 | 1426 / 1809 | 7% | 0.21 | 31 / 472 |
kidney | 29% | 9.43 | 26 / 89 | 53% | 2.30 | 474 / 901 |
peripheral blood | 79% | 84.50 | 731 / 929 | 0% | 0 | 0 / 0 |
brain | 65% | 45.73 | 1722 / 2642 | 2% | 0.06 | 17 / 705 |
thymus | 35% | 9.85 | 228 / 653 | 31% | 0.90 | 189 / 605 |
intestine | 32% | 19.68 | 305 / 966 | 34% | 26.80 | 181 / 527 |
adrenal gland | 52% | 12.02 | 135 / 258 | 11% | 0.29 | 26 / 230 |
prostate | 55% | 19.87 | 134 / 245 | 3% | 0.06 | 14 / 502 |
uterus | 9% | 3.08 | 16 / 170 | 42% | 2.32 | 191 / 459 |
breast | 15% | 6.29 | 68 / 459 | 25% | 0.83 | 280 / 1118 |
lymph node | 0% | 0 | 0 / 0 | 28% | 0.98 | 8 / 29 |
liver | 2% | 0.97 | 5 / 226 | 22% | 5.60 | 91 / 406 |
tonsil | 0% | 0 | 0 / 0 | 24% | 0.51 | 11 / 45 |
adipose | 17% | 4.98 | 207 / 1204 | 0% | 0 | 0 / 0 |
ovary | 3% | 0.56 | 6 / 180 | 6% | 0.16 | 27 / 430 |
blood vessel | 7% | 1.74 | 87 / 1335 | 0% | 0 | 0 / 0 |
heart | 3% | 1.00 | 24 / 861 | 0% | 0 | 0 / 0 |
muscle | 1% | 0.80 | 9 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0030277 | Biological process | maintenance of gastrointestinal epithelium |
GO_0003382 | Biological process | epithelial cell morphogenesis |
GO_0016323 | Cellular component | basolateral plasma membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | VSIG1 |
Protein name | V-set and immunoglobulin domain containing 1 V-set and immunoglobulin domain-containing protein 1 (Cell surface A33 antigen) (Glycoprotein A34) |
Synonyms | GPA34 |
Description | |
Accessions | Q86XK7 ENST00000415430.7 [Q86XK7-2] ENST00000458383.1 C9JY48 ENST00000217957.10 [Q86XK7-1] |