Insufficient scRNA-seq data for expression of VARS2 at single-cell level.
Insufficient scRNA-seq data for expression of VARS2 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 4095.50 | 2639 / 2642 | 17% | 0.25 | 120 / 705 |
kidney | 100% | 3053.21 | 89 / 89 | 2% | 0.03 | 21 / 901 |
skin | 100% | 2313.85 | 1808 / 1809 | 2% | 0.03 | 9 / 472 |
stomach | 100% | 2079.51 | 359 / 359 | 2% | 0.02 | 5 / 286 |
esophagus | 100% | 2982.14 | 1445 / 1445 | 2% | 0.02 | 3 / 183 |
bladder | 100% | 2425.81 | 21 / 21 | 2% | 0.02 | 8 / 504 |
uterus | 100% | 2942.65 | 170 / 170 | 1% | 0.01 | 6 / 459 |
ovary | 100% | 3475.94 | 180 / 180 | 1% | 0.02 | 5 / 430 |
lung | 100% | 2496.54 | 577 / 578 | 1% | 0.01 | 13 / 1155 |
breast | 100% | 2303.77 | 459 / 459 | 1% | 0.01 | 6 / 1118 |
intestine | 100% | 2398.32 | 966 / 966 | 0% | 0.00 | 1 / 527 |
thymus | 100% | 3862.04 | 653 / 653 | 0% | 0.00 | 1 / 605 |
adrenal gland | 100% | 3034.37 | 258 / 258 | 0% | 0 | 0 / 230 |
liver | 100% | 2694.38 | 226 / 226 | 0% | 0 | 0 / 406 |
pancreas | 100% | 1857.24 | 328 / 328 | 0% | 0 | 0 / 178 |
prostate | 100% | 2757.98 | 245 / 245 | 0% | 0 | 0 / 502 |
spleen | 100% | 3160.53 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 100% | 2317.20 | 1203 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 2114.28 | 800 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1837.23 | 1330 / 1335 | 0% | 0 | 0 / 0 |
heart | 97% | 1554.79 | 837 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 73% | 1440.94 | 679 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0106074 | Biological process | aminoacyl-tRNA metabolism involved in translational fidelity |
GO_0006438 | Biological process | valyl-tRNA aminoacylation |
GO_0005829 | Cellular component | cytosol |
GO_0005739 | Cellular component | mitochondrion |
GO_0002161 | Molecular function | aminoacyl-tRNA editing activity |
GO_0004832 | Molecular function | valine-tRNA ligase activity |
GO_0005515 | Molecular function | protein binding |
GO_0005524 | Molecular function | ATP binding |
Gene name | VARS2 |
Protein name | Valine--tRNA ligase, mitochondrial (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS) (Valyl-tRNA synthetase-like) Valine--tRNA ligase, mitochondrial (EC 6.1.1.9) (Valyl-tRNA synthetase) Valine--tRNA ligase, mitochondrial (Valyl-tRNA synthetase 2, mitochondrial) |
Synonyms | VARSL VARS2L KIAA1885 |
Description | FUNCTION: Catalyzes the attachment of valine to tRNA(Val) in a two-step reaction: valine is first activated by ATP to form Val-AMP and then transferred to the acceptor end of tRNA(Val). . FUNCTION: Catalyzes the attachment of valine to tRNA(Val) in a two-step reaction: valine is first activated by ATP to form Val-AMP and then transferred to the acceptor end of tRNA(Val). . FUNCTION: Catalyzes the attachment of valine to tRNA(Val) in a two-step reaction: valine is first activated by ATP to form Val-AMP and then transferred to the acceptor end of tRNA(Val). . FUNCTION: Catalyzes the attachment of valine to tRNA(Val) in a two-step reaction: valine is first activated by ATP to form Val-AMP and then transferred to the acceptor end of tRNA(Val). . FUNCTION: Catalyzes the attachment of valine to tRNA(Val) in a two-step reaction: valine is first activated by ATP to form Val-AMP and then transferred to the acceptor end of tRNA(Val). . FUNCTION: Catalyzes the attachment of valine to tRNA(Val) in a two-step reaction: valine is first activated by ATP to form Val-AMP and then transferred to the acceptor end of tRNA(Val). . FUNCTION: Catalyzes the attachment of valine to tRNA(Val) in a two-step reaction: valine is first activated by ATP to form Val-AMP and then transferred to the acceptor end of tRNA(Val). . FUNCTION: Catalyzes the attachment of valine to tRNA(Val) in a two-step reaction: valine is first activated by ATP to form Val-AMP and then transferred to the acceptor end of tRNA(Val). . FUNCTION: Catalyzes the attachment of valine to tRNA(Val) in a two-step reaction: valine is first activated by ATP to form Val-AMP and then transferred to the acceptor end of tRNA(Val). . FUNCTION: Catalyzes the attachment of valine to tRNA(Val) in a two-step reaction: valine is first activated by ATP to form Val-AMP and then transferred to the acceptor end of tRNA(Val). . FUNCTION: Catalyzes the attachment of valine to tRNA(Val) in a two-step reaction: valine is first activated by ATP to form Val-AMP and then transferred to the acceptor end of tRNA(Val). . FUNCTION: Catalyzes the attachment of valine to tRNA(Val) in a two-step reaction: valine is first activated by ATP to form Val-AMP and then transferred to the acceptor end of tRNA(Val). . |
Accessions | A2ABL6 ENST00000548165.2 ENST00000431578.5 ENST00000428017.5 ENST00000452966.5 B7ZL25 ENST00000676266.1 [Q5ST30-1] ENST00000551709.2 ENST00000428577.6 ENST00000549458.5 ENST00000425563.5 ENST00000552560.5 Q5ST30 A0A140TA36 ENST00000414570.5 ENST00000433908.5 A0A0G2JL52 A0A140T8Y0 ENST00000553245.5 ENST00000625423.2 [Q5ST30-3] A0A0G2JIA5 ENST00000421263.1 B4E0K6 ENST00000415079.6 [Q5ST30-1] ENST00000549900.2 B7ZCJ6 ENST00000547340.2 ENST00000383369.7 ENST00000416187.5 ENST00000450090.6 ENST00000434089.5 A0A140TA40 ENST00000541562.6 [Q5ST30-1] ENST00000383540.7 A0A0A0MTG1 ENST00000550773.2 ENST00000548842.5 ENST00000443384.5 ENST00000411697.5 A0A140TA45 ENST00000672801.1 A0A140TA35 ENST00000546854.5 [Q5ST30-4] ENST00000446577.5 ENST00000321897.9 [Q5ST30-1] |