URAD report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
goblet cell	8 studies	31% ± 12%	Explore
epithelial cell	5 studies	32% ± 10%	Explore
enterocyte	4 studies	20% ± 1%	Explore
intestinal crypt stem cell	4 studies	22% ± 2%	Explore
progenitor cell	3 studies	27% ± 7%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
intestine	3 studies	17% ± 1%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
intestine	65%	545.15	629 / 966	42%	15.41	219 / 527
stomach	1%	0.03	2 / 359	31%	10.13	88 / 286
breast	30%	10.07	138 / 459	0%	0.01	2 / 1118
adipose	29%	8.63	349 / 1204	0%	0	0 / 0
bladder	5%	0.29	1 / 21	18%	6.80	93 / 504
spleen	22%	2.10	53 / 241	0%	0	0 / 0
brain	19%	4.91	507 / 2642	0%	0	0 / 705
peripheral blood	15%	2.07	140 / 929	0%	0	0 / 0
kidney	7%	0.53	6 / 89	0%	0.02	2 / 901
pancreas	5%	0.37	17 / 328	1%	0.08	2 / 178
esophagus	1%	0.19	16 / 1445	4%	0.16	8 / 183
lung	2%	0.15	10 / 578	1%	0.25	14 / 1155
thymus	1%	0.08	8 / 653	0%	0.36	2 / 605
skin	1%	0.11	20 / 1809	0%	0	0 / 472
blood vessel	1%	0.09	13 / 1335	0%	0	0 / 0
uterus	0%	0	0 / 170	1%	0.17	4 / 459
adrenal gland	0%	0.03	1 / 258	0%	1.03	1 / 230
prostate	1%	0.13	2 / 245	0%	0	0 / 502
liver	0%	0	0 / 226	0%	0.04	2 / 406
heart	0%	0.02	3 / 861	0%	0	0 / 0
ovary	0%	0	0 / 180	0%	0.02	1 / 430
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
muscle	0%	0	0 / 803	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1