Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 8 studies | 25% ± 7% | |
ciliated cell | 6 studies | 33% ± 12% | |
epithelial cell | 5 studies | 38% ± 18% | |
endothelial cell | 5 studies | 24% ± 7% | |
classical monocyte | 4 studies | 20% ± 4% | |
epithelial cell of proximal tubule | 4 studies | 20% ± 3% | |
kidney loop of Henle epithelial cell | 4 studies | 27% ± 10% | |
myeloid cell | 4 studies | 27% ± 9% | |
basal cell | 4 studies | 26% ± 11% | |
astrocyte | 4 studies | 24% ± 5% | |
oligodendrocyte | 4 studies | 19% ± 1% | |
pancreatic A cell | 3 studies | 24% ± 4% | |
type B pancreatic cell | 3 studies | 27% ± 6% | |
conventional dendritic cell | 3 studies | 24% ± 8% | |
retinal pigment epithelial cell | 3 studies | 33% ± 20% | |
fibroblast | 3 studies | 31% ± 14% | |
monocyte | 3 studies | 21% ± 6% | |
type II pneumocyte | 3 studies | 34% ± 18% | |
dendritic cell | 3 studies | 36% ± 6% | |
goblet cell | 3 studies | 20% ± 5% | |
GABAergic neuron | 3 studies | 28% ± 7% | |
glutamatergic neuron | 3 studies | 31% ± 7% | |
interneuron | 3 studies | 27% ± 11% | |
neuron | 3 studies | 22% ± 2% | |
hepatocyte | 3 studies | 39% ± 24% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 1565.88 | 258 / 258 | 100% | 28.54 | 230 / 230 |
bladder | 100% | 450.19 | 21 / 21 | 100% | 18.06 | 504 / 504 |
ovary | 100% | 716.08 | 180 / 180 | 100% | 16.13 | 430 / 430 |
stomach | 100% | 335.58 | 359 / 359 | 100% | 14.06 | 286 / 286 |
thymus | 100% | 1218.67 | 653 / 653 | 100% | 32.28 | 605 / 605 |
prostate | 100% | 664.98 | 245 / 245 | 100% | 22.22 | 501 / 502 |
intestine | 100% | 425.37 | 966 / 966 | 100% | 15.28 | 525 / 527 |
uterus | 100% | 356.24 | 170 / 170 | 99% | 13.79 | 456 / 459 |
breast | 100% | 403.23 | 458 / 459 | 99% | 12.47 | 1108 / 1118 |
esophagus | 100% | 413.09 | 1444 / 1445 | 99% | 9.89 | 181 / 183 |
kidney | 100% | 671.75 | 89 / 89 | 99% | 10.19 | 890 / 901 |
skin | 99% | 360.37 | 1792 / 1809 | 100% | 17.54 | 470 / 472 |
pancreas | 98% | 262.31 | 323 / 328 | 100% | 14.52 | 178 / 178 |
liver | 99% | 266.73 | 224 / 226 | 99% | 16.10 | 403 / 406 |
lung | 99% | 385.89 | 571 / 578 | 100% | 10.56 | 1150 / 1155 |
brain | 98% | 316.22 | 2597 / 2642 | 100% | 10.58 | 702 / 705 |
eye | 0% | 0 | 0 / 0 | 100% | 16.66 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 22.14 | 29 / 29 |
spleen | 100% | 393.15 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 15.68 | 1 / 1 |
adipose | 100% | 380.50 | 1201 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 422.85 | 1330 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 634.23 | 799 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 910.85 | 851 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 8.77 | 41 / 45 |
peripheral blood | 43% | 153.71 | 400 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0034551 | Biological process | mitochondrial respiratory chain complex III assembly |
GO_0033617 | Biological process | mitochondrial cytochrome c oxidase assembly |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0097177 | Molecular function | mitochondrial ribosome binding |
Gene name | UQCC5 |
Protein name | Ubiquinol-cytochrome c reductase complex assembly factor 5 Ubiquinol-cytochrome c reductase complex assembly factor 5 (Small integral membrane protein 4) |
Synonyms | SMIM4 C3orf78 |
Description | FUNCTION: Required for the assembly and stability of the mitochondrial ubiquinol-cytochrome c reductase complex (complex III (CIII) or cytochrome b-c1 complex), a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain (ETC) which drives oxidative phosphorylation (By similarity). Mediates early complex III biogenesis (By similarity). Participates in regulating the levels of electron transport chain proteins, and therefore energy supply, in response to changes in energy demand (By similarity). Also involved in the first steps of cytochrome c oxidase complex (complex IV) assembly . . |
Accessions | C9JAX8 ENST00000476842.1 ENST00000307106.3 ENST00000477703.6 Q8WVI0 F8W7Q2 |