Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| club cell | 5 studies | 39% ± 28% | |
| respiratory goblet cell | 4 studies | 25% ± 4% | |
| secretory cell | 4 studies | 31% ± 13% | |
| basal cell | 4 studies | 49% ± 14% | |
| ciliated cell | 4 studies | 35% ± 18% | |
| mesothelial cell | 3 studies | 25% ± 2% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| lung | 3 studies | 46% ± 22% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| pancreas | 99% | 181.34 | 326 / 328 | 40% | 95.76 | 71 / 178 |
| bladder | 86% | 3114.38 | 18 / 21 | 51% | 265.38 | 257 / 504 |
| kidney | 98% | 196.97 | 87 / 89 | 27% | 18.12 | 244 / 901 |
| ureter | 0% | 0 | 0 / 0 | 100% | 1385.09 | 1 / 1 |
| esophagus | 34% | 96.83 | 498 / 1445 | 30% | 42.31 | 55 / 183 |
| ovary | 12% | 5.12 | 21 / 180 | 49% | 23.90 | 209 / 430 |
| skin | 58% | 39.83 | 1041 / 1809 | 0% | 0.18 | 2 / 472 |
| stomach | 48% | 87.12 | 174 / 359 | 9% | 6.05 | 27 / 286 |
| lung | 25% | 115.94 | 144 / 578 | 27% | 93.38 | 315 / 1155 |
| adipose | 39% | 402.70 | 468 / 1204 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 24% | 16.79 | 11 / 45 |
| brain | 23% | 30.22 | 618 / 2642 | 0% | 0.02 | 1 / 705 |
| uterus | 6% | 7.98 | 10 / 170 | 17% | 71.42 | 80 / 459 |
| heart | 18% | 63.31 | 158 / 861 | 0% | 0 | 0 / 0 |
| prostate | 13% | 28.76 | 32 / 245 | 0% | 0.16 | 2 / 502 |
| intestine | 3% | 2.16 | 30 / 966 | 5% | 2.64 | 24 / 527 |
| liver | 4% | 1.15 | 9 / 226 | 1% | 1.24 | 5 / 406 |
| blood vessel | 4% | 14.96 | 57 / 1335 | 0% | 0 | 0 / 0 |
| peripheral blood | 3% | 7.05 | 29 / 929 | 0% | 0 | 0 / 0 |
| thymus | 2% | 0.92 | 10 / 653 | 1% | 1.76 | 8 / 605 |
| breast | 0% | 0.08 | 1 / 459 | 2% | 0.45 | 23 / 1118 |
| spleen | 1% | 0.99 | 2 / 241 | 0% | 0 | 0 / 0 |
| adrenal gland | 0% | 2.48 | 1 / 258 | 0% | 0 | 0 / 230 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
| muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0030855 | Biological process | epithelial cell differentiation |
| GO_0009617 | Biological process | response to bacterium |
| GO_0070062 | Cellular component | extracellular exosome |
| GO_0120001 | Cellular component | apical plasma membrane urothelial plaque |
| GO_0016020 | Cellular component | membrane |
| GO_0005515 | Molecular function | protein binding |
| GO_0005198 | Molecular function | structural molecule activity |
| Gene name | UPK1B |
| Protein name | Uroplakin-1b (Uroplakin Ib) Uroplakin-1b (UP1b) (Tetraspanin-20) (Tspan-20) (Uroplakin Ib) (UPIb) |
| Synonyms | TSPAN20 |
| Description | FUNCTION: Component of the asymmetric unit membrane (AUM); a highly specialized biomembrane elaborated by terminally differentiated urothelial cells. May play an important role in normal bladder epithelial physiology, possibly in regulating membrane permeability of superficial umbrella cells or in stabilizing the apical membrane through AUM/cytoskeletal interactions (By similarity). . |
| Accessions | ENST00000494855.5 Q6IAS0 C9J6N2 O75841 ENST00000460625.1 C9J9M7 E7ETN9 ENST00000479520.5 ENST00000497685.5 C9J027 ENST00000264234.8 |
