Name | Number of supported studies | Average coverage | |
---|---|---|---|
GABAergic neuron | 11 studies | 56% ± 22% | |
glutamatergic neuron | 11 studies | 65% ± 23% | |
astrocyte | 9 studies | 36% ± 19% | |
oligodendrocyte precursor cell | 7 studies | 22% ± 5% | |
interneuron | 6 studies | 57% ± 15% | |
neuron | 4 studies | 38% ± 18% | |
retinal ganglion cell | 4 studies | 73% ± 18% | |
GABAergic interneuron | 3 studies | 55% ± 17% | |
granule cell | 3 studies | 36% ± 26% | |
GABAergic amacrine cell | 3 studies | 33% ± 8% | |
OFF-bipolar cell | 3 studies | 54% ± 7% | |
ON-bipolar cell | 3 studies | 53% ± 12% | |
glycinergic amacrine cell | 3 studies | 40% ± 11% | |
retina horizontal cell | 3 studies | 60% ± 24% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 76% | 553.56 | 186 / 245 | 72% | 5.08 | 359 / 502 |
brain | 86% | 725.66 | 2285 / 2642 | 57% | 2.59 | 405 / 705 |
kidney | 94% | 330.94 | 84 / 89 | 45% | 3.26 | 402 / 901 |
adrenal gland | 18% | 56.37 | 47 / 258 | 49% | 3.37 | 112 / 230 |
intestine | 64% | 138.91 | 614 / 966 | 1% | 0.02 | 4 / 527 |
uterus | 45% | 175.75 | 76 / 170 | 9% | 1.95 | 40 / 459 |
thymus | 32% | 43.75 | 208 / 653 | 17% | 0.68 | 102 / 605 |
esophagus | 21% | 30.13 | 297 / 1445 | 3% | 0.06 | 5 / 183 |
lung | 12% | 14.62 | 68 / 578 | 4% | 0.35 | 50 / 1155 |
skin | 4% | 4.25 | 66 / 1809 | 4% | 0.18 | 21 / 472 |
eye | 0% | 0 | 0 / 0 | 8% | 0.26 | 6 / 80 |
stomach | 6% | 6.93 | 23 / 359 | 0% | 0.00 | 1 / 286 |
pancreas | 0% | 0 | 0 / 328 | 5% | 0.23 | 9 / 178 |
ovary | 1% | 2.32 | 1 / 180 | 4% | 0.17 | 16 / 430 |
liver | 0% | 1.17 | 1 / 226 | 3% | 0.22 | 14 / 406 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.04 | 1 / 29 |
breast | 1% | 1.69 | 4 / 459 | 3% | 0.20 | 28 / 1118 |
bladder | 0% | 0 | 0 / 21 | 2% | 0.10 | 11 / 504 |
blood vessel | 0% | 0.51 | 2 / 1335 | 0% | 0 | 0 / 0 |
adipose | 0% | 0.10 | 1 / 1204 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006915 | Biological process | apoptotic process |
GO_0038007 | Biological process | netrin-activated signaling pathway |
GO_0098742 | Biological process | cell-cell adhesion via plasma-membrane adhesion molecules |
GO_0021859 | Biological process | pyramidal neuron differentiation |
GO_2001222 | Biological process | regulation of neuron migration |
GO_0007411 | Biological process | axon guidance |
GO_0009986 | Cellular component | cell surface |
GO_0005886 | Cellular component | plasma membrane |
GO_0005042 | Molecular function | netrin receptor activity |
Gene name | UNC5D |
Protein name | Netrin receptor UNC5D (Protein unc-5 homolog 4) (Protein unc-5 homolog D) Netrin receptor UNC5 Unc-5 netrin receptor D |
Synonyms | KIAA1777 UNQ6012/PRO34692 UNC5H4 |
Description | FUNCTION: Receptor for the netrin NTN4 that promotes neuronal cell survival (By similarity). Plays a role in cell-cell adhesion and cell guidance. Receptor for netrin involved in cell migration. Plays a role in axon guidance by mediating axon repulsion of neuronal growth cones in the developing nervous system upon ligand binding (By similarity). May play a role in apoptosis in response to DNA damage . It also acts as a dependence receptor required for apoptosis induction when not associated with netrin ligand . Mediates cell-cell adhesion via its interaction with FLRT3 on an adjacent cell (By similarity). . FUNCTION: Receptor for netrin required for axon guidance. Mediates axon repulsion of neuronal growth cones in the developing nervous system upon ligand binding. . FUNCTION: Receptor for netrin required for axon guidance. Mediates axon repulsion of neuronal growth cones in the developing nervous system upon ligand binding. . FUNCTION: Receptor for netrin required for axon guidance. Mediates axon repulsion of neuronal growth cones in the developing nervous system upon ligand binding. . |
Accessions | ENST00000416672.5 C9J1I0 ENST00000404895.7 [Q6UXZ4-1] ENST00000287272.6 Q6UXZ4 ENST00000420357.5 ENST00000453357.6 [Q6UXZ4-2] C9J2B6 E9PDS8 ENST00000449677.1 H7BXJ2 |