Insufficient scRNA-seq data for expression of UBQLN4 at single-cell level.
Insufficient scRNA-seq data for expression of UBQLN4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3448.94 | 1445 / 1445 | 100% | 62.81 | 183 / 183 |
stomach | 100% | 3163.27 | 359 / 359 | 100% | 54.79 | 286 / 286 |
brain | 100% | 4383.85 | 2641 / 2642 | 100% | 85.53 | 705 / 705 |
lung | 100% | 3088.63 | 578 / 578 | 100% | 57.55 | 1153 / 1155 |
intestine | 100% | 3178.64 | 966 / 966 | 100% | 51.76 | 526 / 527 |
ovary | 100% | 2908.31 | 180 / 180 | 100% | 69.85 | 429 / 430 |
breast | 100% | 2956.10 | 459 / 459 | 100% | 79.99 | 1115 / 1118 |
bladder | 100% | 3765.19 | 21 / 21 | 100% | 53.27 | 502 / 504 |
prostate | 100% | 3802.38 | 245 / 245 | 100% | 46.42 | 500 / 502 |
skin | 100% | 3394.03 | 1809 / 1809 | 100% | 76.44 | 470 / 472 |
uterus | 100% | 4256.84 | 170 / 170 | 100% | 59.94 | 457 / 459 |
pancreas | 100% | 2565.95 | 328 / 328 | 99% | 39.97 | 176 / 178 |
thymus | 100% | 2770.62 | 653 / 653 | 98% | 32.14 | 594 / 605 |
liver | 100% | 2300.88 | 226 / 226 | 96% | 36.16 | 390 / 406 |
kidney | 100% | 2868.17 | 89 / 89 | 93% | 27.30 | 842 / 901 |
adrenal gland | 100% | 2622.50 | 258 / 258 | 84% | 21.75 | 193 / 230 |
adipose | 100% | 2761.77 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2815.10 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 34.70 | 29 / 29 |
muscle | 100% | 4887.57 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2867.47 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 50.13 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 30.77 | 1 / 1 |
eye | 0% | 0 | 0 / 0 | 99% | 32.88 | 79 / 80 |
heart | 99% | 2339.21 | 850 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 64% | 1080.06 | 593 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0032434 | Biological process | regulation of proteasomal ubiquitin-dependent protein catabolic process |
GO_0006281 | Biological process | DNA repair |
GO_0006974 | Biological process | DNA damage response |
GO_0006511 | Biological process | ubiquitin-dependent protein catabolic process |
GO_0006914 | Biological process | autophagy |
GO_1901097 | Biological process | negative regulation of autophagosome maturation |
GO_2000042 | Biological process | negative regulation of double-strand break repair via homologous recombination |
GO_0031410 | Cellular component | cytoplasmic vesicle |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0032991 | Cellular component | protein-containing complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0031595 | Cellular component | nuclear proteasome complex |
GO_0090734 | Cellular component | site of DNA damage |
GO_0005829 | Cellular component | cytosol |
GO_0005776 | Cellular component | autophagosome |
GO_0005737 | Cellular component | cytoplasm |
GO_0031597 | Cellular component | cytosolic proteasome complex |
GO_0005634 | Cellular component | nucleus |
GO_0042802 | Molecular function | identical protein binding |
GO_0036435 | Molecular function | K48-linked polyubiquitin modification-dependent protein binding |
GO_0031593 | Molecular function | polyubiquitin modification-dependent protein binding |
GO_0005515 | Molecular function | protein binding |
Gene name | UBQLN4 |
Protein name | Ubiquilin-4 (Ataxin-1 interacting ubiquitin-like protein) (A1Up) (Ataxin-1 ubiquitin-like-interacting protein A1U) (Connexin43-interacting protein of 75 kDa) (CIP75) |
Synonyms | UBIN C1orf6 CIP75 |
Description | FUNCTION: Regulator of protein degradation that mediates the proteasomal targeting of misfolded, mislocalized or accumulated proteins . Acts by binding polyubiquitin chains of target proteins via its UBA domain and by interacting with subunits of the proteasome via its ubiquitin-like domain . Key regulator of DNA repair that represses homologous recombination repair: in response to DNA damage, recruited to sites of DNA damage following phosphorylation by ATM and acts by binding and removing ubiquitinated MRE11 from damaged chromatin, leading to MRE11 degradation by the proteasome . MRE11 degradation prevents homologous recombination repair, redirecting double-strand break repair toward non-homologous end joining (NHEJ) . Specifically recognizes and binds mislocalized transmembrane-containing proteins and targets them to proteasomal degradation . Collaborates with DESI1/POST in the export of ubiquitinated proteins from the nucleus to the cytoplasm . Also plays a role in the regulation of the proteasomal degradation of non-ubiquitinated GJA1 (By similarity). Acts as an adapter protein that recruits UBQLN1 to the autophagy machinery . Mediates the association of UBQLN1 with autophagosomes and the autophagy-related protein LC3 (MAP1LC3A/B/C) and may assist in the maturation of autophagosomes to autolysosomes by mediating autophagosome-lysosome fusion . . |
Accessions | ENST00000368309.4 [Q9NRR5-1] Q9NRR5 |