TXLNA report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell	6 studies	19% ± 2%	Explore
epithelial cell	4 studies	30% ± 12%	Explore
myeloid cell	3 studies	17% ± 1%	Explore
fibroblast	3 studies	17% ± 0%	Explore
ciliated cell	3 studies	27% ± 3%	Explore
basal cell	3 studies	16% ± 1%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	4 studies	21% ± 3%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	5241.73	459 / 459	100%	81.82	1118 / 1118
esophagus	100%	7154.06	1445 / 1445	100%	50.10	183 / 183
prostate	100%	7736.09	245 / 245	100%	64.68	502 / 502
skin	100%	7295.93	1809 / 1809	100%	109.09	472 / 472
uterus	100%	8782.46	170 / 170	100%	89.78	459 / 459
lung	100%	5857.83	578 / 578	100%	65.38	1154 / 1155
thymus	100%	7117.18	653 / 653	100%	75.49	604 / 605
intestine	100%	6910.14	966 / 966	100%	53.54	526 / 527
bladder	100%	7049.95	21 / 21	100%	62.05	503 / 504
ovary	100%	6715.73	180 / 180	100%	54.16	429 / 430
pancreas	100%	3937.69	327 / 328	100%	59.45	178 / 178
kidney	100%	5282.61	89 / 89	100%	51.09	898 / 901
stomach	100%	5186.33	359 / 359	100%	47.65	285 / 286
liver	100%	5733.89	226 / 226	100%	43.11	404 / 406
brain	99%	3429.27	2618 / 2642	100%	53.60	705 / 705
adrenal gland	100%	8248.15	258 / 258	98%	50.91	225 / 230
adipose	100%	5549.92	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	74.65	29 / 29
spleen	100%	6837.25	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	105.87	45 / 45
ureter	0%	0	0 / 0	100%	42.64	1 / 1
blood vessel	100%	6505.77	1334 / 1335	0%	0	0 / 0
muscle	100%	3036.65	800 / 803	0%	0	0 / 0
heart	99%	3227.26	854 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	99%	65.16	79 / 80
peripheral blood	76%	3291.52	708 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0