Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 15 studies | 41% ± 17% | |
glutamatergic neuron | 10 studies | 30% ± 13% | |
neuron | 6 studies | 44% ± 8% | |
retinal ganglion cell | 4 studies | 50% ± 25% | |
GABAergic neuron | 4 studies | 31% ± 10% | |
astrocyte | 3 studies | 20% ± 3% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 11 studies | 30% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 29376.37 | 2627 / 2642 | 97% | 193.33 | 686 / 705 |
adrenal gland | 99% | 12311.89 | 256 / 258 | 44% | 103.89 | 101 / 230 |
eye | 0% | 0 | 0 / 0 | 100% | 232.10 | 80 / 80 |
skin | 0% | 0 | 0 / 1809 | 88% | 114.76 | 416 / 472 |
ovary | 0% | 0 | 0 / 180 | 47% | 13.72 | 200 / 430 |
kidney | 0% | 0 | 0 / 89 | 33% | 9.93 | 295 / 901 |
lymph node | 0% | 0 | 0 / 0 | 28% | 4.30 | 8 / 29 |
liver | 0% | 0 | 0 / 226 | 16% | 3.88 | 66 / 406 |
uterus | 0% | 0 | 0 / 170 | 9% | 2.18 | 40 / 459 |
esophagus | 0% | 0 | 0 / 1445 | 8% | 1.18 | 14 / 183 |
lung | 0% | 0 | 0 / 578 | 7% | 1.14 | 86 / 1155 |
prostate | 0% | 0 | 0 / 245 | 7% | 1.23 | 34 / 502 |
breast | 0% | 0 | 0 / 459 | 3% | 0.56 | 30 / 1118 |
bladder | 0% | 0 | 0 / 21 | 2% | 0.43 | 9 / 504 |
stomach | 0% | 0 | 0 / 359 | 2% | 0.58 | 5 / 286 |
pancreas | 0% | 0 | 0 / 328 | 2% | 0.57 | 3 / 178 |
spleen | 2% | 37.59 | 4 / 241 | 0% | 0 | 0 / 0 |
intestine | 0% | 6.30 | 3 / 966 | 1% | 0.14 | 6 / 527 |
thymus | 0% | 0 | 0 / 653 | 0% | 0.05 | 1 / 605 |
muscle | 0% | 2.36 | 1 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 12.27 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
adipose | 0% | 0 | 0 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 0 | 0 / 1335 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0000278 | Biological process | mitotic cell cycle |
GO_0031115 | Biological process | negative regulation of microtubule polymerization |
GO_0000226 | Biological process | microtubule cytoskeleton organization |
GO_0043209 | Cellular component | myelin sheath |
GO_0005874 | Cellular component | microtubule |
GO_0072686 | Cellular component | mitotic spindle |
GO_0070062 | Cellular component | extracellular exosome |
GO_0043025 | Cellular component | neuronal cell body |
GO_0045171 | Cellular component | intercellular bridge |
GO_0005930 | Cellular component | axoneme |
GO_0005829 | Cellular component | cytosol |
GO_0015630 | Cellular component | microtubule cytoskeleton |
GO_0005737 | Cellular component | cytoplasm |
GO_0033269 | Cellular component | internode region of axon |
GO_0005634 | Cellular component | nucleus |
GO_0005200 | Molecular function | structural constituent of cytoskeleton |
GO_0005525 | Molecular function | GTP binding |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
GO_0003924 | Molecular function | GTPase activity |
Gene name | TUBB4A |
Protein name | Tubulin beta 4A class IVa Tubulin beta-4A chain (Tubulin 5 beta) (Tubulin beta-4 chain) Tubulin beta chain |
Synonyms | TUBB4 TUBB5 |
Description | FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . |
Accessions | ENST00000600216.5 ENST00000595324.5 ENST00000594075.5 M0R0X0 ENST00000594290.5 M0R278 ENST00000596926.5 M0QYM7 ENST00000598006.1 M0R2T4 ENST00000594276.5 M0R2D3 M0QY85 ENST00000264071.7 M0QZL7 ENST00000598635.1 M0R1I1 M0R0M1 M0R042 ENST00000597686.5 ENST00000601152.5 M0QY37 M0QX14 ENST00000601640.5 ENST00000596291.1 P04350 |