TTC33 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
glutamatergic neuron	4 studies	41% ± 14%	Explore
oligodendrocyte	4 studies	27% ± 13%	Explore
endothelial cell	3 studies	20% ± 1%	Explore
GABAergic neuron	3 studies	43% ± 8%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	4 studies	37% ± 12%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	649.28	1444 / 1445	99%	6.53	182 / 183
brain	100%	719.12	2632 / 2642	100%	10.12	703 / 705
lung	100%	700.31	577 / 578	99%	6.54	1149 / 1155
thymus	100%	810.85	652 / 653	98%	7.66	594 / 605
adrenal gland	100%	750.41	258 / 258	97%	7.87	224 / 230
prostate	100%	672.70	244 / 245	97%	6.35	489 / 502
ovary	100%	861.92	180 / 180	97%	4.71	415 / 430
kidney	100%	550.57	89 / 89	96%	8.16	868 / 901
breast	100%	799.54	459 / 459	95%	5.45	1064 / 1118
stomach	100%	550.43	358 / 359	95%	5.49	272 / 286
pancreas	98%	351.67	323 / 328	96%	5.86	171 / 178
intestine	100%	758.59	966 / 966	94%	5.18	496 / 527
uterus	100%	881.48	170 / 170	94%	5.47	432 / 459
liver	100%	443.82	226 / 226	92%	5.04	374 / 406
bladder	100%	712.95	21 / 21	90%	4.79	454 / 504
skin	100%	556.24	1804 / 1809	84%	5.31	395 / 472
blood vessel	100%	966.65	1335 / 1335	0%	0	0 / 0
muscle	100%	1169.56	803 / 803	0%	0	0 / 0
spleen	100%	534.14	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	2.11	1 / 1
adipose	100%	847.70	1203 / 1204	0%	0	0 / 0
heart	98%	505.95	843 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	91%	4.31	41 / 45
lymph node	0%	0	0 / 0	83%	4.29	24 / 29
peripheral blood	64%	355.09	592 / 929	0%	0	0 / 0
eye	0%	0	0 / 0	51%	2.35	41 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0