TTC23L report

Query

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	5 studies	30% ± 13%	Explore
glutamatergic neuron	4 studies	44% ± 18%	Explore
GABAergic neuron	3 studies	27% ± 7%	Explore
astrocyte	3 studies	36% ± 12%	Explore
interneuron	3 studies	42% ± 21%	Explore
oligodendrocyte	3 studies	35% ± 18%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	5 studies	33% ± 20%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
adrenal gland	100%	140.55	258 / 258	23%	0.45	53 / 230
thymus	100%	100.78	651 / 653	18%	0.27	106 / 605
brain	91%	72.35	2409 / 2642	23%	0.41	162 / 705
prostate	97%	67.31	238 / 245	15%	0.22	75 / 502
ovary	91%	38.23	163 / 180	17%	0.31	73 / 430
breast	69%	61.05	318 / 459	38%	0.77	420 / 1118
skin	77%	59.60	1390 / 1809	29%	0.58	135 / 472
uterus	91%	50.13	155 / 170	12%	0.21	54 / 459
kidney	89%	47.38	79 / 89	14%	0.22	126 / 901
bladder	81%	54.71	17 / 21	20%	0.56	99 / 504
lung	79%	65.06	458 / 578	13%	0.25	145 / 1155
blood vessel	73%	26.87	970 / 1335	0%	0	0 / 0
pancreas	63%	17.74	208 / 328	8%	0.20	14 / 178
stomach	70%	20.65	252 / 359	1%	0.02	3 / 286
spleen	54%	13.68	131 / 241	0%	0	0 / 0
esophagus	47%	12.10	676 / 1445	5%	0.09	9 / 183
liver	48%	13.38	108 / 226	2%	0.04	8 / 406
intestine	49%	12.08	472 / 966	1%	0.01	3 / 527
eye	0%	0	0 / 0	44%	0.90	35 / 80
adipose	30%	7.63	367 / 1204	0%	0	0 / 0
heart	20%	4.75	170 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	2%	0.03	1 / 45
muscle	2%	0.74	16 / 803	0%	0	0 / 0
peripheral blood	0%	0.15	3 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1