Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 6 studies | 22% ± 7% | |
glutamatergic neuron | 5 studies | 38% ± 19% | |
endothelial cell | 4 studies | 19% ± 2% | |
GABAergic neuron | 4 studies | 34% ± 13% | |
epithelial cell | 3 studies | 22% ± 3% | |
oligodendrocyte precursor cell | 3 studies | 25% ± 3% | |
interneuron | 3 studies | 34% ± 18% | |
oligodendrocyte | 3 studies | 18% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 443.79 | 1443 / 1445 | 100% | 14.03 | 183 / 183 |
ovary | 100% | 512.53 | 180 / 180 | 99% | 14.26 | 427 / 430 |
stomach | 100% | 380.30 | 359 / 359 | 99% | 14.44 | 284 / 286 |
breast | 100% | 549.48 | 459 / 459 | 99% | 16.35 | 1107 / 1118 |
intestine | 100% | 469.87 | 966 / 966 | 99% | 14.84 | 520 / 527 |
lung | 99% | 332.34 | 571 / 578 | 100% | 16.83 | 1150 / 1155 |
brain | 98% | 383.44 | 2599 / 2642 | 100% | 20.68 | 702 / 705 |
bladder | 100% | 484.33 | 21 / 21 | 97% | 14.60 | 491 / 504 |
prostate | 100% | 443.12 | 245 / 245 | 97% | 16.41 | 486 / 502 |
pancreas | 98% | 205.31 | 321 / 328 | 98% | 11.29 | 175 / 178 |
uterus | 100% | 523.19 | 170 / 170 | 96% | 14.73 | 441 / 459 |
thymus | 100% | 489.08 | 653 / 653 | 96% | 11.13 | 579 / 605 |
skin | 100% | 557.97 | 1809 / 1809 | 95% | 15.54 | 449 / 472 |
kidney | 100% | 408.18 | 89 / 89 | 95% | 12.22 | 854 / 901 |
adrenal gland | 100% | 684.67 | 258 / 258 | 89% | 11.13 | 204 / 230 |
liver | 100% | 249.00 | 226 / 226 | 88% | 8.27 | 359 / 406 |
adipose | 100% | 484.07 | 1204 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 492.06 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 396.63 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 415.23 | 1334 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 11.71 | 28 / 29 |
tonsil | 0% | 0 | 0 / 0 | 96% | 13.68 | 43 / 45 |
heart | 95% | 452.36 | 818 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 81% | 8.59 | 65 / 80 |
peripheral blood | 62% | 235.70 | 573 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0090646 | Biological process | mitochondrial tRNA processing |
GO_0030488 | Biological process | tRNA methylation |
GO_0006397 | Biological process | mRNA processing |
GO_0031167 | Biological process | rRNA methylation |
GO_0031515 | Cellular component | tRNA (m1A) methyltransferase complex |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0005739 | Cellular component | mitochondrion |
GO_0016433 | Molecular function | rRNA (adenine) methyltransferase activity |
GO_0061953 | Molecular function | mRNA (adenine-N1-)-methyltransferase activity |
GO_0160107 | Molecular function | tRNA (adenine(58)-N1)-methyltransferase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | TRMT61B |
Protein name | tRNA (adenine(58)-N(1))-methyltransferase (EC 2.1.1.220) tRNA (adenine(58)-N(1))-methyltransferase, mitochondrial (EC 2.1.1.220) (mRNA methyladenosine-N(1)-methyltransferase) (EC 2.1.1.-) |
Synonyms | |
Description | FUNCTION: Methyltransferase that catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in various tRNAs in mitochondrion, including tRNA(Leu) (deciphering codons UUA or UUG), tRNA(Lys) and tRNA(Ser) (deciphering codons UCA, UCU, UCG or UCC) . Catalyzes the formation of 1-methyladenosine at position 947 of mitochondrial 16S ribosomal RNA and this modification is most likely important for mitoribosomal structure and function . In addition to tRNA N(1)-methyltransferase activity, also acts as a mRNA N(1)-methyltransferase by mediating methylation of adenosine residues at the N(1) position of MT-ND5 mRNA, leading to interfere with mitochondrial translation . . |
Accessions | H7C2E8 ENST00000306108.10 ENST00000419999.5 Q9BVS5 F8WDR2 ENST00000439947.1 |