Insufficient scRNA-seq data for expression of TRMO at single-cell level.
Insufficient scRNA-seq data for expression of TRMO at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 1262.38 | 653 / 653 | 100% | 13.74 | 605 / 605 |
breast | 100% | 880.60 | 459 / 459 | 100% | 11.42 | 1117 / 1118 |
prostate | 100% | 790.66 | 245 / 245 | 100% | 11.66 | 501 / 502 |
esophagus | 100% | 512.07 | 1441 / 1445 | 100% | 7.15 | 183 / 183 |
stomach | 100% | 567.54 | 358 / 359 | 100% | 7.38 | 286 / 286 |
uterus | 100% | 594.29 | 170 / 170 | 100% | 8.60 | 457 / 459 |
brain | 100% | 433.66 | 2630 / 2642 | 100% | 13.25 | 705 / 705 |
intestine | 100% | 624.37 | 965 / 966 | 100% | 8.15 | 525 / 527 |
pancreas | 99% | 405.94 | 326 / 328 | 100% | 8.01 | 178 / 178 |
lung | 100% | 682.37 | 576 / 578 | 100% | 8.18 | 1151 / 1155 |
ovary | 100% | 660.97 | 180 / 180 | 99% | 6.06 | 427 / 430 |
liver | 100% | 528.95 | 226 / 226 | 99% | 6.25 | 403 / 406 |
skin | 100% | 764.05 | 1809 / 1809 | 99% | 8.14 | 468 / 472 |
kidney | 100% | 627.15 | 89 / 89 | 99% | 8.42 | 893 / 901 |
bladder | 100% | 570.81 | 21 / 21 | 98% | 7.38 | 496 / 504 |
adrenal gland | 100% | 793.02 | 258 / 258 | 98% | 8.54 | 225 / 230 |
adipose | 100% | 680.60 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 13.56 | 29 / 29 |
spleen | 100% | 1110.51 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 10.62 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.48 | 1 / 1 |
muscle | 99% | 354.63 | 795 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 374.25 | 1320 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 9.02 | 79 / 80 |
peripheral blood | 98% | 684.54 | 907 / 929 | 0% | 0 | 0 / 0 |
heart | 94% | 305.00 | 806 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0030488 | Biological process | tRNA methylation |
GO_0089715 | Molecular function | tRNA (L-threonylcarbamoyladenosine(37)-C2) methyltransferase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | TRMO |
Protein name | tRNA methyltransferase O Chromosome 9 open reading frame 156, isoform CRA_b (tRNA methyltransferase O) tRNA (adenine(37)-N6)-methyltransferase (EC 2.1.1.-) (tRNA methyltransferase O) |
Synonyms | C9orf156 hCG_29948 HSPC219 |
Description | FUNCTION: S-adenosyl-L-methionine-dependent methyltransferase responsible for the addition of the methyl group in the formation of N6-methyl-N6-threonylcarbamoyladenosine at position 37 (m(6)t(6)A37) of the tRNA anticodon loop of tRNA(Ser)(GCU) . The methyl group of m(6)t(6)A37 may improve the efficiency of the tRNA decoding ability (By similarity). . |
Accessions | Q5T112 Q5T114 ENST00000375118.1 ENST00000375117.8 Q9BU70 ENST00000455506.1 ENST00000375119.8 Q5T111 |