Insufficient scRNA-seq data for expression of TRIM49B at single-cell level.
Insufficient scRNA-seq data for expression of TRIM49B at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 13% | 0.79 | 331 / 2642 | 0% | 0 | 0 / 705 |
blood vessel | 10% | 0.32 | 127 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 9% | 1.98 | 84 / 929 | 0% | 0 | 0 / 0 |
prostate | 7% | 0.46 | 18 / 245 | 0% | 0.01 | 1 / 502 |
intestine | 7% | 0.23 | 72 / 966 | 0% | 0 | 0 / 527 |
uterus | 4% | 0.09 | 7 / 170 | 2% | 0.13 | 10 / 459 |
esophagus | 5% | 0.25 | 66 / 1445 | 1% | 0.02 | 2 / 183 |
muscle | 5% | 0.23 | 43 / 803 | 0% | 0 | 0 / 0 |
bladder | 5% | 0.10 | 1 / 21 | 0% | 0.02 | 2 / 504 |
stomach | 2% | 0.05 | 8 / 359 | 1% | 0.03 | 2 / 286 |
heart | 3% | 0.07 | 25 / 861 | 0% | 0 | 0 / 0 |
ovary | 2% | 0.07 | 4 / 180 | 0% | 0.01 | 2 / 430 |
skin | 2% | 0.06 | 32 / 1809 | 1% | 0.02 | 4 / 472 |
lung | 1% | 0.02 | 6 / 578 | 2% | 0.08 | 18 / 1155 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.04 | 1 / 45 |
pancreas | 2% | 0.10 | 6 / 328 | 0% | 0 | 0 / 178 |
breast | 1% | 0.03 | 4 / 459 | 1% | 0.02 | 8 / 1118 |
thymus | 1% | 0.02 | 6 / 653 | 1% | 0.05 | 4 / 605 |
adrenal gland | 2% | 0.03 | 4 / 258 | 0% | 0 | 0 / 230 |
spleen | 1% | 0.06 | 3 / 241 | 0% | 0 | 0 / 0 |
kidney | 1% | 0.04 | 1 / 89 | 0% | 0.01 | 1 / 901 |
adipose | 1% | 0.03 | 14 / 1204 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 0% | 0.00 | 1 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0016567 | Biological process | protein ubiquitination |
GO_0010468 | Biological process | regulation of gene expression |
GO_0045087 | Biological process | innate immune response |
GO_0005737 | Cellular component | cytoplasm |
GO_0061630 | Molecular function | ubiquitin protein ligase activity |
GO_0008270 | Molecular function | zinc ion binding |
Gene name | TRIM49B |
Protein name | Putative tripartite motif-containing protein 49B (RING finger protein 18B) |
Synonyms | RNF18B |
Description | |
Accessions | A6NDI0 ENST00000332682.9 ENST00000622138.4 |