TRIM47 | OmnibusX

Name	Number of supported studies	Average coverage
fibroblast	5 studies	23% ± 5%	Explore
endothelial cell	5 studies	27% ± 7%	Explore
endothelial cell of lymphatic vessel	4 studies	22% ± 5%	Explore
endothelial cell of artery	3 studies	18% ± 2%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of TRIM47 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	99%	1485.05	2619 / 2642	100%	109.47	703 / 705
esophagus	100%	2808.54	1444 / 1445	98%	49.86	180 / 183
intestine	100%	2859.72	966 / 966	98%	37.84	515 / 527
uterus	100%	2645.51	170 / 170	97%	64.28	447 / 459
thymus	99%	1459.06	648 / 653	98%	37.79	592 / 605
breast	100%	2028.24	459 / 459	97%	48.03	1080 / 1118
kidney	100%	2881.04	89 / 89	95%	42.37	857 / 901
lung	100%	1919.42	576 / 578	94%	42.08	1091 / 1155
stomach	98%	1358.04	351 / 359	95%	34.50	272 / 286
bladder	100%	3402.81	21 / 21	85%	36.98	428 / 504
skin	87%	1576.30	1575 / 1809	94%	52.87	446 / 472
ovary	79%	669.73	143 / 180	97%	48.58	419 / 430
prostate	100%	1893.42	245 / 245	75%	13.11	375 / 502
pancreas	75%	807.80	247 / 328	96%	60.85	170 / 178
liver	89%	841.47	202 / 226	78%	32.52	318 / 406
adrenal gland	94%	949.47	242 / 258	54%	15.53	125 / 230
lymph node	0%	0	0 / 0	100%	24.83	29 / 29
spleen	100%	2859.95	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	12.34	1 / 1
adipose	100%	2266.12	1203 / 1204	0%	0	0 / 0
blood vessel	100%	2623.52	1333 / 1335	0%	0	0 / 0
heart	98%	1140.97	847 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	98%	63.42	44 / 45
eye	0%	0	0 / 0	56%	12.98	45 / 80
muscle	50%	306.79	402 / 803	0%	0	0 / 0
peripheral blood	4%	18.77	35 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

Gene name	TRIM47
Protein name	Tripartite motif containing 47 E3 ubiquitin-protein ligase TRIM47 (EC 2.3.2.27) (Gene overexpressed in astrocytoma protein) (RING finger protein 100) (Tripartite motif-containing protein 47)
Synonyms	GOA RNF100
Description	FUNCTION: E3 ubiquitin-protein ligase that mediates the ubiquitination and proteasomal degradation of CYLD. .
Accessions	ENST00000585333.1 K7EJ63 ENST00000586495.1 ENST00000587339.2 K7EQ30 Q96LD4 ENST00000254816.6 [Q96LD4-1] A0A0M3HER3

GO_0016567	Biological process	protein ubiquitination
GO_0005829	Cellular component	cytosol
GO_0005634	Cellular component	nucleus
GO_0004842	Molecular function	ubiquitin-protein transferase activity
GO_0008270	Molecular function	zinc ion binding

TRIM47 report