TRAPPC13 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
oligodendrocyte	6 studies	25% ± 5%	Explore
endothelial cell	5 studies	20% ± 3%	Explore
astrocyte	5 studies	27% ± 7%	Explore
epithelial cell	4 studies	21% ± 5%	Explore
glutamatergic neuron	4 studies	52% ± 20%	Explore
oligodendrocyte precursor cell	4 studies	29% ± 7%	Explore
neuron	3 studies	23% ± 8%	Explore
GABAergic neuron	3 studies	49% ± 3%	Explore
interneuron	3 studies	39% ± 16%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	5 studies	41% ± 17%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	100%	1221.12	245 / 245	100%	12.77	502 / 502
brain	100%	1171.03	2641 / 2642	100%	13.00	705 / 705
breast	100%	971.87	459 / 459	100%	11.98	1114 / 1118
thymus	100%	1075.07	653 / 653	100%	10.35	602 / 605
lung	100%	900.91	576 / 578	100%	8.76	1153 / 1155
esophagus	100%	990.68	1445 / 1445	99%	7.08	182 / 183
kidney	100%	928.48	89 / 89	99%	9.29	893 / 901
uterus	100%	1015.11	170 / 170	99%	8.85	454 / 459
bladder	100%	993.43	21 / 21	99%	8.04	498 / 504
adrenal gland	100%	1048.00	258 / 258	99%	11.22	227 / 230
intestine	100%	1043.66	966 / 966	99%	7.99	520 / 527
ovary	100%	753.87	180 / 180	99%	6.03	424 / 430
pancreas	100%	505.64	327 / 328	98%	7.67	175 / 178
stomach	100%	841.55	359 / 359	98%	7.05	280 / 286
liver	100%	569.72	226 / 226	97%	5.88	394 / 406
skin	100%	831.00	1807 / 1809	89%	7.61	421 / 472
adipose	100%	916.81	1204 / 1204	0%	0	0 / 0
blood vessel	100%	994.59	1335 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	7.79	29 / 29
spleen	100%	1015.63	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	8.71	45 / 45
ureter	0%	0	0 / 0	100%	4.44	1 / 1
muscle	100%	784.12	802 / 803	0%	0	0 / 0
heart	98%	763.69	844 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	65%	4.59	52 / 80
peripheral blood	65%	387.45	603 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0