Name | Number of supported studies | Average coverage | |
---|---|---|---|
interneuron | 6 studies | 31% ± 20% | |
microglial cell | 6 studies | 22% ± 6% | |
endothelial cell | 5 studies | 29% ± 12% | |
oligodendrocyte precursor cell | 5 studies | 27% ± 10% | |
epithelial cell | 5 studies | 22% ± 6% | |
GABAergic neuron | 5 studies | 40% ± 16% | |
astrocyte | 5 studies | 28% ± 8% | |
macrophage | 5 studies | 24% ± 5% | |
glutamatergic neuron | 4 studies | 53% ± 19% | |
oligodendrocyte | 4 studies | 25% ± 4% | |
hematopoietic precursor cell | 3 studies | 16% ± 0% | |
neuron | 3 studies | 26% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 6 studies | 39% ± 15% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2468.75 | 1445 / 1445 | 100% | 26.44 | 183 / 183 |
lung | 100% | 2220.90 | 578 / 578 | 100% | 21.37 | 1155 / 1155 |
breast | 100% | 2575.53 | 459 / 459 | 100% | 31.92 | 1116 / 1118 |
prostate | 100% | 2199.29 | 245 / 245 | 100% | 27.51 | 501 / 502 |
brain | 100% | 2001.46 | 2633 / 2642 | 100% | 25.10 | 705 / 705 |
thymus | 100% | 2277.18 | 653 / 653 | 99% | 22.42 | 601 / 605 |
stomach | 100% | 1968.85 | 359 / 359 | 99% | 20.02 | 284 / 286 |
bladder | 100% | 2602.48 | 21 / 21 | 99% | 18.31 | 500 / 504 |
uterus | 100% | 2592.24 | 170 / 170 | 99% | 18.89 | 455 / 459 |
adrenal gland | 100% | 3497.74 | 258 / 258 | 99% | 21.03 | 227 / 230 |
intestine | 100% | 2402.96 | 966 / 966 | 99% | 18.52 | 520 / 527 |
kidney | 100% | 1638.30 | 89 / 89 | 99% | 20.84 | 889 / 901 |
pancreas | 100% | 1398.63 | 327 / 328 | 99% | 19.42 | 176 / 178 |
ovary | 100% | 3209.04 | 180 / 180 | 98% | 12.55 | 420 / 430 |
skin | 100% | 2686.49 | 1809 / 1809 | 97% | 26.10 | 460 / 472 |
liver | 100% | 1175.86 | 226 / 226 | 91% | 10.37 | 370 / 406 |
adipose | 100% | 2445.59 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2467.88 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 16.84 | 29 / 29 |
spleen | 100% | 2179.24 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 22.16 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.44 | 1 / 1 |
muscle | 100% | 1921.00 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 1343.68 | 839 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 92% | 1629.27 | 859 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 90% | 12.82 | 72 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0061635 | Biological process | regulation of protein complex stability |
GO_0007030 | Biological process | Golgi organization |
GO_0006888 | Biological process | endoplasmic reticulum to Golgi vesicle-mediated transport |
GO_0048208 | Biological process | COPII vesicle coating |
GO_0099022 | Biological process | vesicle tethering |
GO_0045054 | Biological process | constitutive secretory pathway |
GO_0030008 | Cellular component | TRAPP complex |
GO_0005829 | Cellular component | cytosol |
GO_0005794 | Cellular component | Golgi apparatus |
GO_1990072 | Cellular component | TRAPPIII protein complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0005515 | Molecular function | protein binding |
Gene name | TRAPPC11 |
Protein name | Trafficking protein particle complex subunit 11 |
Synonyms | C4orf41 |
Description | FUNCTION: Involved in endoplasmic reticulum to Golgi apparatus trafficking at a very early stage. . FUNCTION: Involved in endoplasmic reticulum to Golgi apparatus trafficking at a very early stage. . |
Accessions | ENST00000512476.1 D6R9T9 Q7Z392 ENST00000505676.5 ENST00000334690.11 [Q7Z392-1] D6RHE5 ENST00000357207.8 [Q7Z392-3] |