TPSG1 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
goblet cell	8 studies	29% ± 8%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
intestine	100%	466.28	962 / 966	67%	13.58	353 / 527
prostate	97%	101.43	238 / 245	59%	1.29	295 / 502
stomach	87%	62.76	312 / 359	60%	6.60	171 / 286
bladder	100%	151.10	21 / 21	28%	3.09	141 / 504
breast	71%	189.86	324 / 459	56%	10.16	621 / 1118
uterus	96%	78.35	164 / 170	12%	0.45	53 / 459
kidney	64%	37.98	57 / 89	40%	5.02	359 / 901
esophagus	84%	171.15	1207 / 1445	19%	0.92	35 / 183
adrenal gland	64%	76.12	166 / 258	37%	4.73	86 / 230
ovary	99%	164.32	178 / 180	2%	0.06	8 / 430
ureter	0%	0	0 / 0	100%	6.04	1 / 1
lung	81%	49.98	467 / 578	14%	0.45	161 / 1155
adipose	73%	37.48	878 / 1204	0%	0	0 / 0
skin	62%	47.62	1122 / 1809	7%	0.21	34 / 472
pancreas	4%	1.21	12 / 328	63%	7.74	113 / 178
blood vessel	51%	23.44	677 / 1335	0%	0	0 / 0
liver	20%	8.51	46 / 226	29%	1.39	117 / 406
thymus	24%	8.61	157 / 653	2%	0.04	10 / 605
brain	13%	5.17	344 / 2642	4%	0.24	28 / 705
eye	0%	0	0 / 0	15%	0.30	12 / 80
heart	15%	4.55	125 / 861	0%	0	0 / 0
muscle	4%	1.23	30 / 803	0%	0	0 / 0
spleen	0%	0.17	1 / 241	0%	0	0 / 0
peripheral blood	0%	0.09	2 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45