Name | Number of supported studies | Average coverage | |
---|---|---|---|
adipocyte | 10 studies | 50% ± 20% | |
fibroblast | 9 studies | 22% ± 4% | |
macrophage | 8 studies | 23% ± 4% | |
hepatocyte | 4 studies | 67% ± 22% | |
endothelial cell | 3 studies | 17% ± 1% | |
alveolar macrophage | 3 studies | 55% ± 2% | |
monocyte | 3 studies | 33% ± 24% | |
type I pneumocyte | 3 studies | 24% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 99% | 836.96 | 454 / 459 | 80% | 22.32 | 894 / 1118 |
lung | 93% | 537.62 | 535 / 578 | 63% | 4.30 | 730 / 1155 |
uterus | 94% | 546.00 | 159 / 170 | 54% | 2.22 | 249 / 459 |
liver | 86% | 567.76 | 195 / 226 | 31% | 0.68 | 124 / 406 |
esophagus | 45% | 1688.51 | 644 / 1445 | 69% | 5.12 | 126 / 183 |
ovary | 34% | 108.02 | 61 / 180 | 70% | 3.32 | 303 / 430 |
adipose | 97% | 1141.84 | 1167 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 84% | 3.78 | 38 / 45 |
skin | 75% | 2441.68 | 1364 / 1809 | 8% | 0.18 | 39 / 472 |
pancreas | 0% | 0.82 | 1 / 328 | 72% | 2.42 | 129 / 178 |
blood vessel | 64% | 283.27 | 850 / 1335 | 0% | 0 | 0 / 0 |
thymus | 16% | 46.91 | 103 / 653 | 42% | 1.58 | 256 / 605 |
bladder | 29% | 77.57 | 6 / 21 | 29% | 0.97 | 147 / 504 |
prostate | 46% | 156.31 | 113 / 245 | 8% | 0.10 | 38 / 502 |
muscle | 34% | 168.22 | 272 / 803 | 0% | 0 | 0 / 0 |
adrenal gland | 17% | 49.05 | 45 / 258 | 5% | 0.06 | 11 / 230 |
stomach | 4% | 17.48 | 15 / 359 | 16% | 0.38 | 47 / 286 |
heart | 21% | 68.36 | 177 / 861 | 0% | 0 | 0 / 0 |
kidney | 3% | 8.55 | 3 / 89 | 16% | 0.94 | 147 / 901 |
intestine | 7% | 20.63 | 67 / 966 | 13% | 0.44 | 67 / 527 |
spleen | 15% | 40.61 | 36 / 241 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 14% | 0.59 | 4 / 29 |
peripheral blood | 12% | 79.14 | 114 / 929 | 0% | 0 | 0 / 0 |
brain | 0% | 0.20 | 2 / 2642 | 5% | 0.10 | 37 / 705 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0005737 | Cellular component | cytoplasm |
GO_0005515 | Molecular function | protein binding |
Gene name | TPRG1 |
Protein name | Tumor protein p63-regulated gene 1 protein (Protein FAM79B) Tumor protein p63 regulated 1 |
Synonyms | FAM79B |
Description | |
Accessions | ENST00000412373.5 ENST00000456832.1 ENST00000425670.1 H7C1G4 ENST00000433971.5 ENST00000345063.8 C9JDW1 C9IYC1 Q6ZUI0 |