Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 15 studies | 31% ± 13% | |
glutamatergic neuron | 8 studies | 35% ± 16% | |
GABAergic neuron | 4 studies | 32% ± 10% | |
ciliated cell | 3 studies | 21% ± 3% | |
neuron | 3 studies | 29% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 9 studies | 31% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 24211.29 | 2639 / 2642 | 98% | 89.08 | 694 / 705 |
esophagus | 64% | 2845.19 | 925 / 1445 | 89% | 17.99 | 163 / 183 |
lung | 56% | 1606.56 | 322 / 578 | 75% | 10.70 | 872 / 1155 |
intestine | 62% | 2300.44 | 601 / 966 | 67% | 7.94 | 355 / 527 |
stomach | 23% | 595.71 | 81 / 359 | 70% | 9.65 | 201 / 286 |
thymus | 28% | 888.52 | 184 / 653 | 63% | 5.50 | 383 / 605 |
kidney | 11% | 263.26 | 10 / 89 | 79% | 11.86 | 715 / 901 |
bladder | 52% | 1580.71 | 11 / 21 | 35% | 3.41 | 178 / 504 |
skin | 28% | 827.28 | 506 / 1809 | 59% | 7.94 | 278 / 472 |
prostate | 7% | 196.43 | 17 / 245 | 80% | 5.36 | 400 / 502 |
eye | 0% | 0 | 0 / 0 | 78% | 8.55 | 62 / 80 |
adrenal gland | 3% | 99.18 | 9 / 258 | 70% | 35.29 | 160 / 230 |
pancreas | 1% | 12.64 | 2 / 328 | 69% | 6.77 | 123 / 178 |
breast | 4% | 78.88 | 18 / 459 | 54% | 5.17 | 604 / 1118 |
tonsil | 0% | 0 | 0 / 0 | 58% | 6.08 | 26 / 45 |
uterus | 13% | 345.44 | 22 / 170 | 41% | 4.30 | 187 / 459 |
liver | 0% | 0 | 0 / 226 | 52% | 4.10 | 212 / 406 |
heart | 48% | 1320.16 | 413 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 47% | 1143.60 | 624 / 1335 | 0% | 0 | 0 / 0 |
ovary | 0% | 0 | 0 / 180 | 45% | 3.63 | 192 / 430 |
muscle | 26% | 850.44 | 210 / 803 | 0% | 0 | 0 / 0 |
adipose | 9% | 194.31 | 103 / 1204 | 0% | 0 | 0 / 0 |
spleen | 3% | 84.50 | 8 / 241 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0014003 | Biological process | oligodendrocyte development |
GO_1904428 | Biological process | negative regulation of tubulin deacetylation |
GO_0051301 | Biological process | cell division |
GO_0032288 | Biological process | myelin assembly |
GO_0051418 | Biological process | microtubule nucleation by microtubule organizing center |
GO_0031334 | Biological process | positive regulation of protein-containing complex assembly |
GO_0046785 | Biological process | microtubule polymerization |
GO_0048709 | Biological process | oligodendrocyte differentiation |
GO_0032273 | Biological process | positive regulation of protein polymerization |
GO_0030953 | Biological process | astral microtubule organization |
GO_0070507 | Biological process | regulation of microtubule cytoskeleton organization |
GO_0031643 | Biological process | positive regulation of myelination |
GO_0001578 | Biological process | microtubule bundle formation |
GO_0005874 | Cellular component | microtubule |
GO_0072686 | Cellular component | mitotic spindle |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0005739 | Cellular component | mitochondrion |
GO_0005815 | Cellular component | microtubule organizing center |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0097427 | Cellular component | microtubule bundle |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0150051 | Cellular component | postsynaptic Golgi apparatus |
GO_0005634 | Cellular component | nucleus |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0015631 | Molecular function | tubulin binding |
GO_0000287 | Molecular function | magnesium ion binding |
GO_0140490 | Molecular function | microtubule nucleator activity |
GO_0008017 | Molecular function | microtubule binding |
GO_0046983 | Molecular function | protein dimerization activity |
GO_0005515 | Molecular function | protein binding |
GO_0003924 | Molecular function | GTPase activity |
Gene name | TPPP |
Protein name | Brain-specific protein p25 alpha, isoform CRA_b (Fibroblast growth factor-2 repression protein-1) (Tubulin polymerization promoting protein) (cDNA FLJ30358 fis, clone BRACE2007749, highly similar to Tubulin polymerization-promoting protein) Tubulin polymerization-promoting protein (TPPP) (EC 3.6.5.-) (25 kDa brain-specific protein) (TPPP/p25) (p24) (p25-alpha) |
Synonyms | hCG_16469 TPPP1 FREP1 |
Description | FUNCTION: Regulator of microtubule dynamics that plays a key role in myelination by promoting elongation of the myelin sheath . Acts as a microtubule nucleation factor in oligodendrocytes: specifically localizes to the postsynaptic Golgi apparatus region, also named Golgi outpost, and promotes microtubule nucleation, an important step for elongation of the myelin sheath . Required for both uniform polarized growth of distal microtubules as well as directing the branching of proximal processes . Shows magnesium-dependent GTPase activity; the role of the GTPase activity is unclear . In addition to microtubule nucleation activity, also involved in microtubule bundling and stabilization of existing microtubules, thereby maintaining the integrity of the microtubule network . Regulates microtubule dynamics by promoting tubulin acetylation: acts by inhibiting the tubulin deacetylase activity of HDAC6 . Also regulates cell migration: phosphorylation by ROCK1 inhibits interaction with HDAC6, resulting in decreased acetylation of tubulin and increased cell motility . Plays a role in cell proliferation by regulating the G1/S-phase transition . Involved in astral microtubule organization and mitotic spindle orientation during early stage of mitosis; this process is regulated by phosphorylation by LIMK2 . . |
Accessions | Q4L233 O94811 ENST00000360578.7 |