Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 7 studies | 21% ± 9% | |
classical monocyte | 5 studies | 27% ± 10% | |
pericyte | 5 studies | 21% ± 5% | |
endothelial cell | 5 studies | 27% ± 11% | |
smooth muscle cell | 5 studies | 18% ± 2% | |
ciliated cell | 5 studies | 26% ± 5% | |
CD16-positive, CD56-dim natural killer cell, human | 3 studies | 19% ± 3% | |
conventional dendritic cell | 3 studies | 33% ± 9% | |
non-classical monocyte | 3 studies | 23% ± 3% | |
myofibroblast cell | 3 studies | 17% ± 2% | |
epithelial cell | 3 studies | 43% ± 8% | |
natural killer cell | 3 studies | 19% ± 2% | |
plasmacytoid dendritic cell | 3 studies | 20% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 361.59 | 180 / 180 | 100% | 7.64 | 430 / 430 |
esophagus | 100% | 357.26 | 1439 / 1445 | 100% | 4.92 | 183 / 183 |
adrenal gland | 100% | 444.29 | 258 / 258 | 95% | 3.97 | 218 / 230 |
stomach | 98% | 315.09 | 353 / 359 | 94% | 5.14 | 268 / 286 |
intestine | 100% | 330.46 | 964 / 966 | 87% | 4.91 | 460 / 527 |
brain | 99% | 425.31 | 2609 / 2642 | 85% | 3.35 | 600 / 705 |
bladder | 100% | 382.67 | 21 / 21 | 83% | 3.38 | 418 / 504 |
pancreas | 99% | 279.56 | 324 / 328 | 83% | 2.59 | 147 / 178 |
prostate | 100% | 375.26 | 244 / 245 | 81% | 2.31 | 405 / 502 |
kidney | 100% | 497.44 | 89 / 89 | 79% | 2.18 | 714 / 901 |
liver | 100% | 269.67 | 225 / 226 | 79% | 2.11 | 321 / 406 |
skin | 100% | 356.21 | 1802 / 1809 | 77% | 2.07 | 362 / 472 |
uterus | 100% | 469.81 | 170 / 170 | 76% | 2.24 | 348 / 459 |
thymus | 99% | 449.43 | 646 / 653 | 77% | 2.77 | 464 / 605 |
lung | 98% | 327.78 | 568 / 578 | 71% | 1.79 | 823 / 1155 |
breast | 99% | 411.79 | 456 / 459 | 60% | 1.59 | 674 / 1118 |
eye | 0% | 0 | 0 / 0 | 100% | 6.94 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 4.89 | 29 / 29 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.17 | 1 / 1 |
spleen | 100% | 348.70 | 240 / 241 | 0% | 0 | 0 / 0 |
adipose | 100% | 418.31 | 1198 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 479.33 | 1327 / 1335 | 0% | 0 | 0 / 0 |
heart | 96% | 200.87 | 826 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 94% | 238.13 | 877 / 929 | 0% | 0 | 0 / 0 |
muscle | 91% | 175.77 | 730 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 67% | 1.76 | 30 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0018095 | Biological process | protein polyglutamylation |
GO_0007288 | Biological process | sperm axoneme assembly |
GO_0007268 | Biological process | chemical synaptic transmission |
GO_0051648 | Biological process | vesicle localization |
GO_0030534 | Biological process | adult behavior |
GO_0005813 | Cellular component | centrosome |
GO_0031514 | Cellular component | motile cilium |
GO_0030424 | Cellular component | axon |
GO_0030425 | Cellular component | dendrite |
GO_0045202 | Cellular component | synapse |
GO_0034451 | Cellular component | centriolar satellite |
GO_0005874 | Cellular component | microtubule |
GO_0005737 | Cellular component | cytoplasm |
GO_0070740 | Molecular function | tubulin-glutamic acid ligase activity |
GO_0008017 | Molecular function | microtubule binding |
Gene name | TPGS1 |
Protein name | Tubulin polyglutamylase complex subunit 1 (PGs1) |
Synonyms | C19orf20 |
Description | FUNCTION: Subunit of the tubulin polyglutamylase complex (TPGC). The complex mediates cilia and flagella polyglutamylation which is essential for their biogenesis and motility (Probable). May act in the targeting of the tubulin polyglutamylase complex. Required for the development of the spermatid flagellum (By similarity). . |
Accessions | Q6ZTW0 ENST00000359315.6 [Q6ZTW0-1] |