Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 7 studies | 31% ± 18% | |
endothelial cell | 6 studies | 25% ± 8% | |
neuron | 4 studies | 24% ± 5% | |
epithelial cell | 4 studies | 25% ± 2% | |
GABAergic neuron | 4 studies | 33% ± 15% | |
astrocyte | 4 studies | 26% ± 7% | |
abnormal cell | 3 studies | 20% ± 2% | |
transit amplifying cell | 3 studies | 25% ± 8% | |
interneuron | 3 studies | 30% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 11313.50 | 2642 / 2642 | 100% | 116.31 | 705 / 705 |
esophagus | 100% | 6717.86 | 1445 / 1445 | 100% | 48.32 | 183 / 183 |
prostate | 100% | 6803.03 | 245 / 245 | 100% | 47.76 | 502 / 502 |
skin | 100% | 8847.63 | 1809 / 1809 | 100% | 59.19 | 472 / 472 |
stomach | 100% | 4566.51 | 359 / 359 | 100% | 42.26 | 286 / 286 |
thymus | 100% | 6935.10 | 653 / 653 | 100% | 46.53 | 605 / 605 |
uterus | 100% | 8006.82 | 170 / 170 | 100% | 49.48 | 459 / 459 |
breast | 100% | 6240.12 | 459 / 459 | 100% | 52.40 | 1116 / 1118 |
bladder | 100% | 6825.57 | 21 / 21 | 100% | 42.18 | 502 / 504 |
adrenal gland | 100% | 7486.22 | 258 / 258 | 100% | 75.47 | 229 / 230 |
intestine | 100% | 6227.89 | 966 / 966 | 99% | 42.03 | 524 / 527 |
kidney | 100% | 4840.37 | 89 / 89 | 99% | 41.04 | 895 / 901 |
lung | 100% | 5632.78 | 577 / 578 | 99% | 42.03 | 1147 / 1155 |
ovary | 100% | 9210.02 | 180 / 180 | 99% | 53.04 | 426 / 430 |
pancreas | 98% | 2721.95 | 320 / 328 | 99% | 38.34 | 176 / 178 |
liver | 100% | 2333.46 | 225 / 226 | 84% | 17.90 | 341 / 406 |
adipose | 100% | 6082.15 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 5677.24 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 56.49 | 80 / 80 |
spleen | 100% | 6214.95 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 52.17 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 40.27 | 1 / 1 |
muscle | 100% | 3415.87 | 800 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 3715.02 | 839 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 37.86 | 28 / 29 |
peripheral blood | 67% | 2757.74 | 622 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006606 | Biological process | protein import into nucleus |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0008139 | Molecular function | nuclear localization sequence binding |
GO_0005515 | Molecular function | protein binding |
GO_0031267 | Molecular function | small GTPase binding |
GO_0061608 | Molecular function | nuclear import signal receptor activity |
Gene name | TNPO2 |
Protein name | TNPO2 variant protein Transportin-2 (Karyopherin beta-2b) Transportin 2 TNPO2 protein Alternative protein TNPO2 |
Synonyms | protein variant |
Description | FUNCTION: Probably functions in nuclear protein import as nuclear transport receptor. Serves as receptor for nuclear localization signals (NLS) in cargo substrates. Is thought to mediate docking of the importin/substrate complex to the nuclear pore complex (NPC) through binding to nucleoporin and the complex is subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to the importin, the importin/substrate complex dissociates and importin is re-exported from the nucleus to the cytoplasm where GTP hydrolysis releases Ran. The directionality of nuclear import is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus (By similarity). . |
Accessions | K7ENW1 ENST00000356861.9 [O14787-2] K7EMA3 ENST00000588216.5 [O14787-2] O14787 K7ESJ3 K7ESG1 K7ELC3 ENST00000590781.1 L8ECE4 ENST00000589337.5 ENST00000589149.5 ENST00000587654.5 ENST00000425528.6 [O14787-1] ENST00000586775.5 Q4LE60 A0A075B780 ENST00000585886.5 ENST00000588491.1 Q05D48 ENST00000592287.5 [O14787-1] ENST00000450764.6 [O14787-2] ENST00000589572.5 K7ESC1 |