Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| type I pneumocyte | 9 studies | 53% ± 18% | |
| cardiac muscle cell | 6 studies | 45% ± 17% | |
| fibroblast | 4 studies | 23% ± 8% | |
| pericyte | 3 studies | 20% ± 4% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| heart | 4 studies | 24% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| lung | 67% | 1516.26 | 387 / 578 | 63% | 12.84 | 727 / 1155 |
| muscle | 100% | 226924.10 | 803 / 803 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 50.77 | 1 / 1 |
| heart | 100% | 106274.54 | 860 / 861 | 0% | 0 | 0 / 0 |
| thymus | 4% | 100.17 | 27 / 653 | 84% | 17.25 | 510 / 605 |
| pancreas | 0% | 4.18 | 1 / 328 | 84% | 12.86 | 150 / 178 |
| ovary | 0% | 0 | 0 / 180 | 70% | 20.57 | 302 / 430 |
| prostate | 8% | 1200.13 | 20 / 245 | 62% | 52.56 | 310 / 502 |
| bladder | 0% | 0 | 0 / 21 | 64% | 21.05 | 322 / 504 |
| intestine | 1% | 11.99 | 5 / 966 | 55% | 8.03 | 292 / 527 |
| stomach | 0% | 4.40 | 1 / 359 | 54% | 8.51 | 154 / 286 |
| uterus | 0% | 0 | 0 / 170 | 45% | 50.97 | 206 / 459 |
| lymph node | 0% | 0 | 0 / 0 | 31% | 1.85 | 9 / 29 |
| tonsil | 0% | 0 | 0 / 0 | 27% | 24.47 | 12 / 45 |
| esophagus | 1% | 91.70 | 21 / 1445 | 25% | 4.32 | 46 / 183 |
| liver | 0% | 0 | 0 / 226 | 25% | 6.56 | 100 / 406 |
| breast | 2% | 124.31 | 9 / 459 | 18% | 2.16 | 198 / 1118 |
| adrenal gland | 3% | 73.29 | 9 / 258 | 11% | 1.73 | 26 / 230 |
| kidney | 2% | 28.91 | 2 / 89 | 12% | 1.51 | 105 / 901 |
| skin | 1% | 109.24 | 18 / 1809 | 6% | 1.44 | 29 / 472 |
| blood vessel | 4% | 465.28 | 57 / 1335 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 4% | 0.15 | 3 / 80 |
| adipose | 2% | 50.84 | 29 / 1204 | 0% | 0 | 0 / 0 |
| peripheral blood | 2% | 144.03 | 22 / 929 | 0% | 0 | 0 / 0 |
| brain | 0% | 5.49 | 9 / 2642 | 2% | 0.10 | 14 / 705 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
| GO_0010038 | Biological process | response to metal ion |
| GO_0003009 | Biological process | skeletal muscle contraction |
| GO_0002086 | Biological process | diaphragm contraction |
| GO_0006937 | Biological process | regulation of muscle contraction |
| GO_0043462 | Biological process | regulation of ATP-dependent activity |
| GO_0060048 | Biological process | cardiac muscle contraction |
| GO_0055010 | Biological process | ventricular cardiac muscle tissue morphogenesis |
| GO_0014883 | Biological process | transition between fast and slow fiber |
| GO_0032972 | Biological process | regulation of muscle filament sliding speed |
| GO_1990584 | Cellular component | cardiac Troponin complex |
| GO_0005861 | Cellular component | troponin complex |
| GO_0005829 | Cellular component | cytosol |
| GO_0042803 | Molecular function | protein homodimerization activity |
| GO_0031013 | Molecular function | troponin I binding |
| GO_0051015 | Molecular function | actin filament binding |
| GO_0048306 | Molecular function | calcium-dependent protein binding |
| GO_0031014 | Molecular function | troponin T binding |
| GO_0005509 | Molecular function | calcium ion binding |
| GO_0005515 | Molecular function | protein binding |
| Gene name | TNNC1 |
| Protein name | Troponin C, slow skeletal and cardiac muscles (TN-C) Troponin C, slow skeletal and cardiac muscles |
| Synonyms | hCG_42573 TNNC |
| Description | FUNCTION: Troponin is the central regulatory protein of striated muscle contraction. Tn consists of three components: Tn-I which is the inhibitor of actomyosin ATPase, Tn-T which contains the binding site for tropomyosin and Tn-C. The binding of calcium to Tn-C abolishes the inhibitory action of Tn on actin filaments. FUNCTION: Troponin is the central regulatory protein of striated muscle contraction. Tn consists of three components: Tn-I which is the inhibitor of actomyosin ATPase, Tn-T which contains the binding site for tropomyosin and Tn-C. The binding of calcium to Tn-C abolishes the inhibitory action of Tn on actin filaments. . FUNCTION: Troponin is the central regulatory protein of striated muscle contraction. Tn consists of three components: Tn-I which is the inhibitor of actomyosin ATPase, Tn-T which contains the binding site for tropomyosin and Tn-C. The binding of calcium to Tn-C abolishes the inhibitory action of Tn on actin filaments. . |
| Accessions | P63316 ENST00000232975.8 Q6FH91 ENST00000496590.1 C9JDI3 |