Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 12 studies | 28% ± 12% | |
epithelial cell | 6 studies | 35% ± 13% | |
endothelial cell of lymphatic vessel | 5 studies | 26% ± 7% | |
microglial cell | 5 studies | 19% ± 4% | |
goblet cell | 5 studies | 34% ± 21% | |
macrophage | 5 studies | 23% ± 4% | |
ciliated cell | 4 studies | 17% ± 2% | |
GABAergic neuron | 3 studies | 33% ± 4% | |
glutamatergic neuron | 3 studies | 42% ± 6% | |
dendritic cell | 3 studies | 17% ± 1% | |
fibroblast | 3 studies | 26% ± 8% | |
basal cell | 3 studies | 32% ± 17% | |
astrocyte | 3 studies | 25% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1906.20 | 1445 / 1445 | 100% | 58.86 | 183 / 183 |
stomach | 100% | 2238.15 | 359 / 359 | 100% | 51.48 | 286 / 286 |
lung | 100% | 2962.52 | 578 / 578 | 100% | 41.60 | 1154 / 1155 |
intestine | 100% | 2886.79 | 966 / 966 | 100% | 49.92 | 526 / 527 |
bladder | 100% | 2484.14 | 21 / 21 | 100% | 39.16 | 503 / 504 |
prostate | 100% | 2844.85 | 245 / 245 | 100% | 84.69 | 501 / 502 |
breast | 100% | 2442.23 | 459 / 459 | 100% | 57.35 | 1114 / 1118 |
ovary | 100% | 1426.80 | 180 / 180 | 99% | 26.15 | 426 / 430 |
pancreas | 100% | 1677.46 | 327 / 328 | 99% | 43.42 | 176 / 178 |
uterus | 100% | 2089.15 | 170 / 170 | 97% | 27.77 | 447 / 459 |
thymus | 100% | 2264.83 | 653 / 653 | 97% | 30.91 | 585 / 605 |
adrenal gland | 100% | 2531.87 | 258 / 258 | 91% | 20.17 | 210 / 230 |
skin | 100% | 2734.37 | 1809 / 1809 | 88% | 25.34 | 417 / 472 |
kidney | 100% | 1381.44 | 89 / 89 | 88% | 17.35 | 792 / 901 |
brain | 96% | 846.72 | 2531 / 2642 | 70% | 8.84 | 495 / 705 |
liver | 94% | 815.54 | 212 / 226 | 42% | 7.21 | 172 / 406 |
adipose | 100% | 2164.97 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2460.79 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 25.54 | 29 / 29 |
spleen | 100% | 2695.70 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 15.06 | 1 / 1 |
tonsil | 0% | 0 | 0 / 0 | 98% | 24.24 | 44 / 45 |
heart | 95% | 815.90 | 816 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 74% | 1165.05 | 683 / 929 | 0% | 0 | 0 / 0 |
muscle | 41% | 218.42 | 327 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 34% | 4.74 | 27 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0042147 | Biological process | retrograde transport, endosome to Golgi |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005829 | Cellular component | cytosol |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0016020 | Cellular component | membrane |
Gene name | TMEM87B |
Protein name | Transmembrane protein 87B |
Synonyms | |
Description | FUNCTION: May be involved in retrograde transport from endosomes to the trans-Golgi network (TGN). . |
Accessions | ENST00000650799.2 ENST00000471632.1 ENST00000283206.9 [Q96K49-1] ENST00000452614.6 A0A494BZZ8 A0A994J791 H7C0B3 A0A3B3IU29 Q96K49 ENST00000649734.1 |