Name | Number of supported studies | Average coverage | |
---|---|---|---|
platelet | 9 studies | 53% ± 14% | |
basal cell | 7 studies | 29% ± 11% | |
megakaryocyte | 6 studies | 58% ± 24% | |
squamous epithelial cell | 4 studies | 43% ± 17% | |
epithelial cell | 4 studies | 35% ± 11% | |
placental villous trophoblast | 3 studies | 37% ± 20% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
placenta | 3 studies | 21% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 38% | 402.10 | 8 / 21 | 65% | 28.50 | 328 / 504 |
esophagus | 39% | 3339.57 | 570 / 1445 | 61% | 18.02 | 112 / 183 |
tonsil | 0% | 0 | 0 / 0 | 100% | 43.78 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.27 | 1 / 1 |
skin | 72% | 2396.74 | 1297 / 1809 | 10% | 1.87 | 47 / 472 |
uterus | 1% | 78.86 | 2 / 170 | 64% | 24.62 | 296 / 459 |
lung | 12% | 54.28 | 72 / 578 | 47% | 9.99 | 546 / 1155 |
prostate | 25% | 165.82 | 62 / 245 | 13% | 0.74 | 65 / 502 |
peripheral blood | 35% | 194.52 | 326 / 929 | 0% | 0 | 0 / 0 |
breast | 1% | 4.22 | 6 / 459 | 32% | 3.29 | 357 / 1118 |
pancreas | 0% | 1.28 | 1 / 328 | 24% | 5.92 | 42 / 178 |
thymus | 0% | 0 | 0 / 653 | 9% | 1.12 | 55 / 605 |
heart | 8% | 38.49 | 71 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 8% | 0.36 | 6 / 80 |
ovary | 0% | 0 | 0 / 180 | 7% | 0.34 | 29 / 430 |
intestine | 0% | 0 | 0 / 966 | 4% | 1.35 | 23 / 527 |
liver | 0% | 0 | 0 / 226 | 3% | 0.28 | 14 / 406 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.20 | 1 / 29 |
stomach | 1% | 9.04 | 3 / 359 | 2% | 0.20 | 7 / 286 |
adrenal gland | 0% | 0 | 0 / 258 | 3% | 0.32 | 6 / 230 |
spleen | 2% | 8.33 | 6 / 241 | 0% | 0 | 0 / 0 |
kidney | 0% | 0 | 0 / 89 | 2% | 0.25 | 14 / 901 |
muscle | 1% | 5.66 | 9 / 803 | 0% | 0 | 0 / 0 |
adipose | 0% | 3.29 | 5 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 1.00 | 1 / 1335 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
brain | 0% | 0 | 0 / 2642 | 0% | 0 | 0 / 705 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016020 | Cellular component | membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | TMEM40 |
Protein name | Transmembrane protein 40 |
Synonyms | |
Description | |
Accessions | Q8WWA1 ENST00000435218.6 [Q8WWA1-2] ENST00000314124.12 [Q8WWA1-1] ENST00000428020.5 ENST00000264728.8 [Q8WWA1-1] H7BZY7 ENST00000435575.5 [Q8WWA1-3] |