Name | Number of supported studies | Average coverage | |
---|---|---|---|
smooth muscle cell | 10 studies | 21% ± 4% | |
pericyte | 10 studies | 20% ± 3% | |
cardiac muscle cell | 4 studies | 26% ± 2% | |
oligodendrocyte precursor cell | 4 studies | 31% ± 8% | |
oligodendrocyte | 4 studies | 23% ± 5% | |
endothelial cell | 3 studies | 19% ± 3% | |
kidney loop of Henle epithelial cell | 3 studies | 18% ± 2% | |
Mueller cell | 3 studies | 21% ± 2% | |
muscle cell | 3 studies | 25% ± 9% | |
GABAergic neuron | 3 studies | 37% ± 5% | |
glutamatergic neuron | 3 studies | 30% ± 10% | |
dendritic cell | 3 studies | 20% ± 3% | |
plasmacytoid dendritic cell | 3 studies | 22% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 25% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 1232.60 | 258 / 258 | 98% | 19.57 | 226 / 230 |
intestine | 99% | 690.45 | 960 / 966 | 97% | 18.69 | 511 / 527 |
thymus | 100% | 1272.41 | 651 / 653 | 96% | 20.81 | 582 / 605 |
prostate | 99% | 553.73 | 242 / 245 | 97% | 12.65 | 485 / 502 |
kidney | 99% | 907.51 | 88 / 89 | 96% | 28.87 | 868 / 901 |
stomach | 97% | 439.57 | 347 / 359 | 98% | 18.70 | 280 / 286 |
liver | 95% | 590.17 | 214 / 226 | 98% | 15.76 | 398 / 406 |
brain | 93% | 525.87 | 2456 / 2642 | 99% | 13.14 | 699 / 705 |
esophagus | 92% | 442.44 | 1329 / 1445 | 97% | 18.00 | 177 / 183 |
uterus | 99% | 717.24 | 168 / 170 | 90% | 12.30 | 411 / 459 |
lung | 96% | 518.85 | 552 / 578 | 92% | 13.48 | 1065 / 1155 |
skin | 94% | 554.93 | 1706 / 1809 | 86% | 11.91 | 406 / 472 |
bladder | 100% | 592.76 | 21 / 21 | 75% | 11.05 | 379 / 504 |
ovary | 100% | 836.03 | 180 / 180 | 70% | 7.34 | 303 / 430 |
breast | 100% | 727.39 | 457 / 459 | 69% | 8.13 | 766 / 1118 |
pancreas | 63% | 205.93 | 207 / 328 | 71% | 6.53 | 127 / 178 |
blood vessel | 100% | 1697.35 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 4151.28 | 803 / 803 | 0% | 0 | 0 / 0 |
adipose | 100% | 983.46 | 1202 / 1204 | 0% | 0 | 0 / 0 |
heart | 97% | 1559.10 | 834 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 87% | 11.05 | 39 / 45 |
lymph node | 0% | 0 | 0 / 0 | 83% | 7.82 | 24 / 29 |
spleen | 73% | 251.51 | 177 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 30% | 261.80 | 275 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 23% | 1.23 | 18 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007029 | Biological process | endoplasmic reticulum organization |
GO_0061033 | Biological process | secretion by lung epithelial cell involved in lung growth |
GO_0051649 | Biological process | establishment of localization in cell |
GO_0071805 | Biological process | potassium ion transmembrane transport |
GO_0010881 | Biological process | regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion |
GO_0008654 | Biological process | phospholipid biosynthetic process |
GO_0070278 | Biological process | extracellular matrix constituent secretion |
GO_0030282 | Biological process | bone mineralization |
GO_0060348 | Biological process | bone development |
GO_0014808 | Biological process | release of sequestered calcium ion into cytosol by sarcoplasmic reticulum |
GO_0060487 | Biological process | lung epithelial cell differentiation |
GO_0048286 | Biological process | lung alveolus development |
GO_0071313 | Biological process | cellular response to caffeine |
GO_0005634 | Cellular component | nucleus |
GO_0033017 | Cellular component | sarcoplasmic reticulum membrane |
GO_0031965 | Cellular component | nuclear membrane |
GO_0042802 | Molecular function | identical protein binding |
GO_0005267 | Molecular function | potassium channel activity |
GO_0005515 | Molecular function | protein binding |
Gene name | TMEM38B |
Protein name | Trimeric intracellular cation channel type B (TRIC-B) (TRICB) (Transmembrane protein 38B) Transmembrane protein 38B |
Synonyms | hCG_1738357 C9orf87 |
Description | FUNCTION: Monovalent cation channel required for maintenance of rapid intracellular calcium release. May act as a potassium counter-ion channel that functions in synchronization with calcium release from intracellular stores. . FUNCTION: Monovalent cation channel required for maintenance of rapid intracellular calcium release. May act as a potassium counter-ion channel that functions in synchronization with calcium release from intracellular stores. . FUNCTION: Monovalent cation channel required for maintenance of rapid intracellular calcium release. May act as a potassium counter-ion channel that functions in synchronization with calcium release from intracellular stores. . FUNCTION: Monovalent cation channel required for maintenance of rapid intracellular calcium release. May act as a potassium counter-ion channel that functions in synchronization with calcium release from intracellular stores. . FUNCTION: Monovalent cation channel required for maintenance of rapid intracellular calcium release. May act as a potassium counter-ion channel that functions in synchronization with calcium release from intracellular stores. . |
Accessions | X6RGH1 ENST00000435034.5 H7C4C1 H7C3B3 ENST00000374692.8 Q9NVV0 ENST00000451560.1 A0A0A0MRS4 ENST00000434214.1 ENST00000374688.5 |