TMEM229B report

Query

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
oligodendrocyte precursor cell	4 studies	27% ± 9%	Explore
GABAergic neuron	3 studies	27% ± 10%	Explore
glutamatergic neuron	3 studies	29% ± 15%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	3 studies	19% ± 1%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	2008.81	2638 / 2642	99%	21.87	701 / 705
thymus	100%	1360.75	653 / 653	99%	11.69	597 / 605
adrenal gland	100%	2635.15	258 / 258	94%	13.89	217 / 230
pancreas	98%	490.17	323 / 328	93%	7.53	166 / 178
prostate	94%	514.30	230 / 245	92%	6.92	463 / 502
intestine	99%	676.99	955 / 966	80%	7.13	419 / 527
bladder	95%	438.62	20 / 21	73%	5.95	367 / 504
kidney	87%	283.35	77 / 89	73%	4.76	656 / 901
stomach	74%	267.28	264 / 359	77%	6.73	221 / 286
breast	61%	234.54	279 / 459	88%	12.89	981 / 1118
skin	37%	110.85	663 / 1809	98%	39.98	463 / 472
uterus	48%	135.88	81 / 170	64%	6.02	292 / 459
lung	61%	203.59	350 / 578	40%	2.65	467 / 1155
eye	0%	0	0 / 0	100%	27.04	80 / 80
spleen	100%	1366.36	241 / 241	0%	0	0 / 0
lymph node	0%	0	0 / 0	97%	8.87	28 / 29
esophagus	42%	116.05	602 / 1445	55%	5.15	100 / 183
tonsil	0%	0	0 / 0	87%	10.29	39 / 45
peripheral blood	67%	344.76	621 / 929	0%	0	0 / 0
ovary	21%	53.04	37 / 180	30%	1.62	127 / 430
adipose	25%	60.18	298 / 1204	0%	0	0 / 0
heart	23%	68.69	196 / 861	0%	0	0 / 0
liver	6%	15.01	13 / 226	15%	0.89	62 / 406
blood vessel	15%	37.70	203 / 1335	0%	0	0 / 0
muscle	0%	0.43	2 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1