Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 8 studies | 21% ± 9% | |
pericyte | 5 studies | 17% ± 3% | |
epithelial cell | 5 studies | 41% ± 18% | |
endothelial cell | 5 studies | 24% ± 6% | |
pancreatic A cell | 4 studies | 35% ± 18% | |
classical monocyte | 4 studies | 25% ± 5% | |
goblet cell | 4 studies | 28% ± 8% | |
ciliated cell | 4 studies | 31% ± 10% | |
type B pancreatic cell | 3 studies | 42% ± 18% | |
non-classical monocyte | 3 studies | 23% ± 10% | |
Mueller cell | 3 studies | 21% ± 5% | |
oligodendrocyte | 3 studies | 22% ± 6% | |
macrophage | 3 studies | 22% ± 2% | |
type I pneumocyte | 3 studies | 21% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3836.56 | 1445 / 1445 | 100% | 76.91 | 183 / 183 |
ovary | 100% | 3680.22 | 180 / 180 | 100% | 55.09 | 430 / 430 |
lung | 100% | 4411.85 | 577 / 578 | 100% | 77.11 | 1154 / 1155 |
brain | 100% | 2739.89 | 2631 / 2642 | 100% | 77.43 | 704 / 705 |
adrenal gland | 100% | 4336.66 | 258 / 258 | 99% | 92.22 | 228 / 230 |
uterus | 100% | 4589.36 | 170 / 170 | 99% | 63.80 | 455 / 459 |
breast | 100% | 3948.72 | 459 / 459 | 99% | 95.84 | 1108 / 1118 |
liver | 100% | 5661.48 | 226 / 226 | 99% | 69.93 | 402 / 406 |
kidney | 100% | 3185.03 | 89 / 89 | 99% | 98.74 | 892 / 901 |
prostate | 100% | 3879.98 | 244 / 245 | 99% | 108.03 | 499 / 502 |
pancreas | 100% | 3329.65 | 328 / 328 | 99% | 73.42 | 176 / 178 |
thymus | 100% | 4793.16 | 653 / 653 | 99% | 93.73 | 598 / 605 |
bladder | 100% | 4077.62 | 21 / 21 | 98% | 63.75 | 495 / 504 |
stomach | 100% | 3405.68 | 359 / 359 | 97% | 70.99 | 278 / 286 |
intestine | 100% | 4093.52 | 966 / 966 | 97% | 72.46 | 509 / 527 |
skin | 100% | 4587.01 | 1804 / 1809 | 94% | 57.81 | 442 / 472 |
adipose | 100% | 4157.43 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 6271.87 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 2307.75 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 57.64 | 45 / 45 |
muscle | 99% | 2148.76 | 796 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 3399.57 | 846 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 86% | 32.12 | 69 / 80 |
lymph node | 0% | 0 | 0 / 0 | 86% | 31.91 | 25 / 29 |
peripheral blood | 79% | 1774.65 | 737 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007030 | Biological process | Golgi organization |
GO_0006886 | Biological process | intracellular protein transport |
GO_0006888 | Biological process | endoplasmic reticulum to Golgi vesicle-mediated transport |
GO_0033116 | Cellular component | endoplasmic reticulum-Golgi intermediate compartment membrane |
GO_0000139 | Cellular component | Golgi membrane |
GO_0030126 | Cellular component | COPI vesicle coat |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0030127 | Cellular component | COPII vesicle coat |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0030134 | Cellular component | COPII-coated ER to Golgi transport vesicle |
GO_0005793 | Cellular component | endoplasmic reticulum-Golgi intermediate compartment |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0030133 | Cellular component | transport vesicle |
GO_0038024 | Molecular function | cargo receptor activity |
Gene name | TMED7 |
Protein name | Transmembrane emp24 domain-containing protein 7 (p24 family protein gamma-3) (p24gamma3) (p27) Transmembrane p24 trafficking protein 7 TMED7 protein |
Synonyms | CGI-109 |
Description | FUNCTION: Potential role in vesicular protein trafficking, mainly in the early secretory pathway. Appears to play a role in the biosynthesis of secreted cargo including processing and post-translational modifications. |
Accessions | G3V2Y2 ENST00000456936.4 [Q9Y3B3-1] Q3B7W7 Q9Y3B3 ENST00000508420.1 |